New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2762591 = | 47 (0.780) | 3 (0.050) | 3/256 | NT | 6.7% | coding (304/789 nt) | PP_2416 | iron ABC transporter ATP‑binding protein |
? | NC_002947 | 2762639 = | 38 (0.660) | coding (256/789 nt) | PP_2416 | iron ABC transporter ATP‑binding protein |
CCACCGGACAGCGACCCCCACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAG > NC_002947/2762443‑2762738 | ccACCGGACAGCGACCCCCACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAacac < 1:257789/149‑1 (MQ=255) tgaaaccctgggcatcgtcggccccaacggctcgggtaaatcctcgctattgaagttgctggcagggctgcgcaaacccgcctgcggcagcgtgcagctcctgggtgagccactggcacagatgccccgccgccgtgttgcccaggcgc > 6:307040‑M1/147‑149 (MQ=255) aCCGGACAGCGACCCCCACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGc < 8:159268/149‑1 (MQ=255) ccGGACAGCGACCCCCACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCt < 2:211046/149‑1 (MQ=255) aaaccctgggcttcgtcgggcccaactgctcgggtaaatcctcgctattgaagttgctggcagggctgcgcaaacccgcctgcggcagcgtgcagctcctgggtgagccactggcacagatgccccgccgccgtgttgcccaggCGCt > 4:49321‑M1/145‑148 (MQ=255) aGCGACCCCCACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCg > 1:322275/1‑148 (MQ=255) cGACCCCCACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCAt < 5:295693/149‑1 (MQ=255) gACCCCCACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATc < 8:277136/149‑1 (MQ=255) cccccACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCGACCGCGTCGAACACGCTGATCGCATc > 6:256120/1‑147 (MQ=255) cccccACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATc > 6:189552/1‑147 (MQ=255) cccccACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCaa < 8:199411/149‑1 (MQ=255) ccccACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCaa < 1:327478/148‑1 (MQ=255) acaGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAgtgtg > 8:118886/1‑149 (MQ=255) aGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTc > 8:106107/1‑149 (MQ=255) cgTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCt < 3:136670/149‑1 (MQ=255) cgTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCt < 5:346068/149‑1 (MQ=255) gTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTg < 2:322275/149‑1 (MQ=255) cAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCt < 4:275549/149‑1 (MQ=255) gTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGa < 1:143383/149‑1 (MQ=255) ggtaaatcctcgctattgaagttgctggcagggctgcgcaaacccgcctgcggcagcgtgcagctcctaggtgagccactggcacagatgccccgccgccgtgttgcccaggCGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGAc < 1:247399‑M1/37‑1 (MQ=255) ggCAGGGCGTCGCGGGCGGCCCGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGAc < 6:298412/148‑1 (MQ=255) gCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGAc > 6:150013/1‑148 (MQ=255) ggCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTg < 2:41723/138‑1 (MQ=255) ggCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTg > 1:41723/1‑138 (MQ=255) gCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGAccagcgc < 7:106107/149‑1 (MQ=255) gCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGAccagcgc < 5:150013/149‑1 (MQ=255) gAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGAccagcgccagc < 6:172272/148‑1 (MQ=255) ttgaagttgctggcagggctgcgcaaacccgcctgcggcagcgtgcagctcctgggtgagccactggcacagatgccccgcggccgtgttgcccaggCGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCt > 6:144669‑M1/98‑148 (MQ=255) cGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCGACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTgg < 5:256120/149‑1 (MQ=255) cGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTgg > 3:230688/1‑149 (MQ=255) ggCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTggg < 5:182529/149‑1 (MQ=255) gcagttgctggcagggctgcgcaaacccgcctgcggcagcgtgcagctccttggtgagccactggcacagatgccccgccgccgtgttgcccaggCGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTgg > 2:247399‑M1/96‑148 (MQ=255) gCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTggg > 6:267041/1‑148 (MQ=255) gCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGc < 5:189552/149‑1 (MQ=255) gggCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAaca > 3:27025/1‑149 (MQ=255) ggCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAacac < 4:253733/149‑1 (MQ=255) tCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGAGCCAGCGCCTGGGCAACAcggcggcg > 1:144283/1‑149 (MQ=255) gcgcAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGAGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCt < 2:144283/148‑1 (MQ=255) cgcAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCtgt < 7:18631/149‑1 (MQ=255) gTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCa < 5:267041/149‑1 (MQ=255) gTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCa < 7:118886/149‑1 (MQ=255) cTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGt < 4:115574/148‑1 (MQ=255) cTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTg > 2:174181/1‑149 (MQ=255) tGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCtgtg < 5:76053/142‑1 (MQ=255) tGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCtgtg > 6:76053/1‑142 (MQ=255) tGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTgg > 1:270162/1‑149 (MQ=255) ccGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCt > 7:309086/1‑149 (MQ=255) agaACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCAccc < 8:309086/149‑1 (MQ=255) aGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCAc > 5:341947/1‑149 (MQ=255) gggCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCgg < 4:140690/149‑1 (MQ=255) ggCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGcag < 2:282965/141‑3 (MQ=255) ggCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGcag > 1:282965/1‑139 (MQ=255) cccAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAg > 7:231258/1‑149 (MQ=255) cAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGcc < 4:230688/149‑1 (MQ=255) cAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGcc < 6:341947/149‑1 (MQ=255) cacGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATa < 3:132081/149‑1 (MQ=255) acGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAg > 3:252611/1‑149 (MQ=255) | CCACCGGACAGCGACCCCCACAGGCGCGTACGCAGGTGCAGGGCGTCGAGGTCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAG > NC_002947/2762443‑2762738 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |