New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2762591 =	47 (0.780)	3 (0.050)	3/256	NT	6.7%	coding (304/789 nt)	PP_2416	iron ABC transporter ATP‑binding protein
	?	NC_002947	2762639 =	38 (0.660)					coding (256/789 nt)	PP_2416	iron ABC transporter ATP‑binding protein

TCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTGGGGCCGACGATGCCCAGGGTTTCA  >  NC_002947/2762494‑2762784                                                                                                                                                  |                                                                                                                                                  ttgaagttgctggcagggctgcgcaaacccgcctgcggcagcgtgcagctcctgggtgagccactggcacagatgccccgcggccgtgttgcccaggCGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCt                                                                                                                                                 >  6:144669‑M1/98‑148 (MQ=255)  cGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCGACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTgg                                                                                                                                               <  5:256120/149‑1 (MQ=255)  cGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTgg                                                                                                                                               >  3:230688/1‑149 (MQ=255)   ggCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTggg                                                                                                                                              <  5:182529/149‑1 (MQ=255)   gcagttgctggcagggctgcgcaaacccgcctgcggcagcgtgcagctccttggtgagccactggcacagatgccccgccgccgtgttgcccaggCGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTgg                                                                                                                                               >  2:247399‑M1/96‑148 (MQ=255)    gCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTggg                                                                                                                                              >  6:267041/1‑148 (MQ=255)    gCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGc                                                                                                                                             <  5:189552/149‑1 (MQ=255)        gggCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAaca                                                                                                                                         >  3:27025/1‑149 (MQ=255)         ggCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAacac                                                                                                                                        <  4:253733/149‑1 (MQ=255)                tCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGAGCCAGCGCCTGGGCAACAcggcggcg                                                                                                                                 >  1:144283/1‑149 (MQ=255)                         gcgcAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGAGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCt                                                                                                                         <  2:144283/148‑1 (MQ=255)                          cgcAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCtgt                                                                                                                       <  7:18631/149‑1 (MQ=255)                              gTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCa                                                                                                                   <  5:267041/149‑1 (MQ=255)                              gTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCa                                                                                                                   <  7:118886/149‑1 (MQ=255)                                 cTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGt                                                                                                                 <  4:115574/148‑1 (MQ=255)                                 cTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTg                                                                                                                >  2:174181/1‑149 (MQ=255)                                  tGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCtgtg                                                                                                                      <  5:76053/142‑1 (MQ=255)                                  tGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCtgtg                                                                                                                      >  6:76053/1‑142 (MQ=255)                                  tGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTgg                                                                                                               >  1:270162/1‑149 (MQ=255)                                    ccGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCt                                                                                                             >  7:309086/1‑149 (MQ=255)                                         agaACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCAccc                                                                                                        <  8:309086/149‑1 (MQ=255)                                                    aGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCAc                                                                                             >  5:341947/1‑149 (MQ=255)                                                                  gggCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCgg                                                                               <  4:140690/149‑1 (MQ=255)                                                                          ggCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGcag                                                                               <  2:282965/141‑3 (MQ=255)                                                                          ggCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGcag                                                                               >  1:282965/1‑139 (MQ=255)                                                                            cccAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAg                                                                     >  7:231258/1‑149 (MQ=255)                                                                              cAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGcc                                                                   <  4:230688/149‑1 (MQ=255)                                                                                   cAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGcc                                                              <  6:341947/149‑1 (MQ=255)                                                                                             ccaggcgctggcgctggtcgagcaacaggccgacacacttgatgcgatcagcgCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCAAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAactgc                                                     >  2:247399‑M2/54‑146 (MQ=255)                                                                                               aggcgctggcgctggtcgagcaacaggccgacacacttgatgcgatcagcgCCTGGGCAACACGGCCGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCaa                                                   >  6:144669‑M2/52‑148 (MQ=255)                                                                                                cacGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATa                                                 <  3:132081/149‑1 (MQ=255)                                                                                                 acGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAg                                                >  3:252611/1‑149 (MQ=255)                                                                                                   GCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGc                                               <  6:280232‑M1/148‑1 (MQ=255)                                                                                                       aTCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGa                                          >  4:65576/1‑149 (MQ=255)                                                                                                        tCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGAt                                         <  2:270162/149‑1 (MQ=255)                                                                                                            aTCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTAc                                     >  6:11620/1‑149 (MQ=255)                                                                                                            aTCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTAc                                     <  5:11620/149‑1 (MQ=255)                                                                                                             gtcgagcaacaggccgacacacttgatgcgatcagcgCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCTAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTAcc                                    <  1:247399‑M2/112‑1 (MQ=255)                                                                                                              cAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTAccc                                   >  3:194431/1‑149 (MQ=255)                                                                                                                aGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGa                                 <  1:192005/149‑1 (MQ=255)                                                                                                                          ccTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTgggg                       >  7:41564/1‑149 (MQ=255)                                                                                                                              ttGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTGGGGCcga                   <  4:27025/149‑1 (MQ=255)                                                                                                                                gCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTGGGGCcgac                  >  3:78373/1‑148 (MQ=255)                                                                                                                                 cTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTGGGGCcgacga                >  5:44341/1‑149 (MQ=255)                                                                                                                                  tCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTGGGGCCGACGAt               >  5:14598/1‑149 (MQ=255)                                                                                                                                     aCCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTGGGGCCGACGATTcc            >  2:275901/1‑149 (MQ=255)                                                                                                                                            ccagcgccTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTGGGGCCGACGATGCCCAGGGtt     >  6:285983/1‑149 (MQ=255)                                                                                                                                              agcgCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCAGTTGGGCCCGACGAAGCCCAGGGttt    >  4:49321‑M2/5‑148 (MQ=255)                                                                                                                                               gcgCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTGGGGCCGACGATGCCCAGGGTTTCa  >  6:307040‑M2/4‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                  TCGGCCAGGGCTTGCTCGACGATGGCGCAGTCCTGCCGGGAGAACGGTGCCAGGGCCGAGAGCCAGGGCGTGCGGCCCAAGGCAACCGCGTCGAACACGCTGATCGCATCAAGTGTGTCGGCCTGTTGCTCGACCAGCGCCAGCGCCTGGGCAACACGGCGGCGGGGCATCTGTGCCAGTGGCTCACCCAGGAGCTGCACGCTGCCGCAGGCGGGTTTGCGCAGCCCTGCCAGCAACTTCAATAGCGAGGATTTACCCGAGCCGTTGGGGCCGACGATGCCCAGGGTTTCA  >  NC_002947/2762494‑2762784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.