New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3135652 | 42 (0.700) | 5 (0.090) | 3/256 | NT | 10.6% | coding (305/1335 nt) | PP_2752 | hypothetical protein |
? | NC_002947 | = 3135680 | 44 (0.760) | coding (333/1335 nt) | PP_2752 | hypothetical protein |
GGATGATCGATTACTTACGCTACATCAACGAAGTCGAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATGGCCGCGTCTTTCCCTACAACTTCCCT > NC_002947/3135508‑3135797 | ggATGATCGATTACTTACGCTACATCAACGAAGTCGAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCg < 3:124184/149‑1 (MQ=255) gATTACTTACGCTACATCAACGAAGTCGAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGt > 3:126049/1‑149 (MQ=255) acttacGCTACATCAACGAAGTCGAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGTTGGCGGTCTAc > 2:10538/1‑149 (MQ=255) acGCTACATCAACGAAGTCGAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCa < 3:38932/147‑1 (MQ=255) cATCAACGAAGTCGAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATg > 5:185939/1‑149 (MQ=255) aTCAACGAAGTCGAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATgg > 1:333173/1‑149 (MQ=255) aTCAACGAAGTCGAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAAGGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATgg < 3:20492/149‑1 (MQ=255) gAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGc > 3:325373/1‑149 (MQ=255) aGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCaccattgggctggtagaccgccaccggagcgccattgaggc < 5:284096‑M1/149‑42 (MQ=255) aTGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCg < 2:333173/149‑1 (MQ=255) tGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCgg > 8:33045/1‑149 (MQ=255) ggCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCg < 4:34614/147‑1 (MQ=255) ggCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCg > 3:34614/1‑147 (MQ=255) gCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTAc < 1:127396/110‑1 (MQ=255) gCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTAc > 2:127396/1‑110 (MQ=255) gCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAaggcc > 3:357175/1‑148 (MQ=255) cTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAaggcc > 1:190416/1‑147 (MQ=255) tCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCaccattgggctggtagaccgccaccggagcgccat < 1:326351‑M1/117‑36 (MQ=255) tCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCaccattgggctggtagaccgccaccggagcgccat < 1:331627‑M1/117‑36 (MQ=255) tCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCaccattgggctggtagaccgccaccggagcgccat > 2:331627‑M1/1‑82 (MQ=255) tCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCaccattgggctggtagaccgccaccggagcgccat > 2:326351‑M1/1‑82 (MQ=255) gCAGGAAGTTGAGACCGAGGGGACGGCCGAGAAGGGCATCGAGTGCTACGAGAGCTTCAAGCACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGAGCCGGCTTCCTATGACCTGGCGGACAAggccgaggccga < 3:230212/147‑1 (MQ=255) cAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCg > 4:81146/1‑149 (MQ=255) cAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCg < 5:314245/149‑1 (MQ=255) tgAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGTTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGc < 1:10538/149‑1 (MQ=255) tgAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCg < 6:379751/148‑1 (MQ=255) tgAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGc > 5:368376/1‑149 (MQ=255) agaCCGAGGGGACGGCCGAGAAGGGCAGCGAGGGCTACGAGCGCTTCAAGACCGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCt < 4:74441/148‑1 (MQ=255) gaCCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGa > 3:85346/1‑149 (MQ=255) cGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCa < 4:85346/149‑1 (MQ=255) gAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACATGGCCGAGGCCGACCGGATTCCGCTGATCAc < 4:126049/149‑1 (MQ=255) aGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGGCAAGGCCGAGGCCGACCGGATTCCGCTGATCAcc > 2:365386/1‑149 (MQ=255) actgCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCgg < 6:185939/146‑1 (MQ=255) gaAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTc < 4:357175/149‑1 (MQ=255) tCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAg < 4:325373/149‑1 (MQ=255) tACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAg > 8:153552/1‑141 (MQ=255) tACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAg < 7:153552/141‑1 (MQ=255) tACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGa > 8:189969/1‑149 (MQ=255) aCGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGAt > 6:345980/1‑149 (MQ=255) cGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATg < 7:33045/149‑1 (MQ=255) gAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATgg > 1:25376/1‑149 (MQ=255) gAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATgg > 1:85009/1‑149 (MQ=255) ttCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATGGCCGCGt > 1:95482/1‑149 (MQ=255) aGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATGGCCGCGTCttt < 2:190416/149‑1 (MQ=255) gCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTgcgccattgaggccgttcttgaagcgctcgtagcactcgatgcccttctcggccgtccactcggtctcacattcctgccagaccagcttgacgccattgatgccgcct < 5:284096‑M2/149‑109 (MQ=255) gCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATGGCCGCGTCTTTCCCTa > 1:325609/1‑148 (MQ=255) cTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATGGCCGCGTCTTTCCCTACaa > 4:279223/1‑149 (MQ=255) tCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATGGCCGCGTCTTTCCCTACAAc > 3:110148/1‑149 (MQ=255) aTGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTgcgccattgaggccgttcttgaagcgctcgtagcactcgatgcccttctcggccgtccactcggtctcacattcctgccaga < 1:326351‑M2/117‑83 (MQ=255) aTGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTgcgccattgaggccgttcttgaagcgctcgtagcactcgatgcccttctcggccgtccactcggtctcacattcctgccaga < 1:331627‑M2/117‑83 (MQ=255) aTGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTgcgccattgaggccgttcttgaagcgctcgtagcactcgatgcccttctcggccgtccactcggtctcacattcctgccaga > 2:331627‑M2/1‑35 (MQ=255) aTGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTgcgccattgaggccgttcttgaagcgctcgtagcactcgatgcccttctcggccgtccactcggtctcacattcctgccaga > 2:326351‑M2/1‑35 (MQ=255) tGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATGGCCGCGTCTTTCCCTACAACTTcc < 2:25376/149‑1 (MQ=255) gcgcTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATGGCCGCGTCTTTCCCTACAACTTCCCt > 1:18440/1‑149 (MQ=255) | GGATGATCGATTACTTACGCTACATCAACGAAGTCGAAGGCGGCATCAATGGCGTCAAGCTGGTCTGGCAGGAATGTGAGACCGAGTGGACGGCCGAGAAGGGCATCGAGTGCTACGAGCGCTTCAAGAACGGCCTCAATGGCGCTCCGGTGGCGGTCTACCAGCCCAATGGTGCGCCGGCTGCCTATGCCCTGGCGGACAAGGCCGAGGCCGACCGGATTCCGCTGATCACCCTCGGCTATGGTCGTACCGAGGCCACCGATGGCCGCGTCTTTCCCTACAACTTCCCT > NC_002947/3135508‑3135797 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |