New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4516403 =	43 (0.710)	3 (0.050)	3/252	NT	7.2%	coding (268/708 nt)	ate	arginyl‑tRNA‑‑protein transferase
	?	NC_002947	4516441 =	37 (0.650)					coding (306/708 nt)	ate	arginyl‑tRNA‑‑protein transferase

TACGCCGATTTGTCGGAAATGGGCTTTCGCCGCAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGAC  >  NC_002947/4516256‑4516549                                                                                                                                                    |                                                                                                                                                   ccttccaggcgaaactcgtagaaccagcagaacggcaggtcgcgtaccaggaaggtggaaaactgatcgcggctgggcgggtacatgtcgccattggcgtggcgcgtttcgatatagcgccggtacagctcgaagtactcttccttgaa                                                                                                                                                   >  3:322683‑M1/148‑149 (MQ=255)       gATTTGTCGGAAATGGTCTTTCTCCGCAGTGTCGACGACCTGTACCTCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGa                                                                                                                                             <  6:246061/149‑1 (MQ=255)        aTTTGTCGGAAATGGGCTTTCGCCGCAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGAc                                                                                                                                            >  5:171047/1‑149 (MQ=255)             tCGGAAATGGGCTTTCGCCGCAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGAc                                                                                                                                       >  7:48725/1‑149 (MQ=255)               ggAAATGGGCTTTCGCCGCAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACg                                                                                                                                                 <  1:144189/137‑1 (MQ=255)               ggAAATGGGCTTTCGCCGCAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACg                                                                                                                                                 >  2:144189/1‑137 (MQ=255)               ggAAATGGGCTTTCGCCGCAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCg                                                                                                                                     >  5:372236/1‑149 (MQ=255)                   aTGGGCTTTCGCCGCAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAAc                                                                                                                                 <  4:267114/149‑1 (MQ=255)                      ggCTTTCGCCGCAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCg                                                                                                                               <  4:53756/148‑1 (MQ=255)                             gccgcAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAgcgcgc                                                                                                                       >  7:245425/1‑149 (MQ=255)                             gccgcAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAgcgcgc                                                                                                                       >  5:19482/1‑149 (MQ=255)                               cgcAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGccc                                                                                                                     >  2:29426/1‑149 (MQ=255)                                  aGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGc                                                                                                                  <  2:321427/149‑1 (MQ=255)                                  aGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGc                                                                                                                  <  6:171047/149‑1 (MQ=255)                                      ggtcgcgtaccaggaaggtggaaaactgatcgcggctgggcgggtacatgtcgccatcggcgtggcgcgtttcgatatagcgccggtacagctcgaagtactcttccttgAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGtt                                                                                                               <  6:97487‑M1/38‑1 (MQ=255)                                        tcgcgtaccaggaaggtggaaaactgatcgcggctgggcgggtacatgtcgccatcggcgtggcgcgtttcgatatagcgccggtacagctcgaagtactcttccttgAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCaa                                                                                                            >  1:52247‑M1/109‑149 (MQ=255)                                        gACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTACCCGCAGCGCGCCCGGCGTTc                                                                                                              >  1:327018/1‑147 (MQ=255)                                            gtaccaggaaggtggaaaactgatcgcggctgggcgggtacatgtcgccatcggcgtggcgcgtttcgatatagcgccggtacagctcgaagtactcttccttgAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGaa                                                                                                        >  5:97487‑M1/105‑149 (MQ=255)                                             ccTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAag                                                                                                       <  8:48725/149‑1 (MQ=255)                                              cTGTACCGGCCACACTGCCAGAACTGCAACGCCTGCGTGCCTGCGCGCATCCCGGCGGCGAGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAaga                                                                                                      <  6:318617/149‑1 (MQ=255)                                              cTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCGGGCGTTCAAGGAaga                                                                                                      <  8:346995/149‑1 (MQ=255)                                              cTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGaa                                                                                                        >  3:190984/1‑147 (MQ=255)                                                 tACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAagag                                                                                                     <  6:372236/147‑1 (MQ=255)                                                   ccGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACt                                                                                                 >  7:21667/1‑149 (MQ=255)                                                      cccACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCg                                                                                              <  8:21667/149‑1 (MQ=255)                                                         acacTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGc                                                                                           <  3:237667/149‑1 (MQ=255)                                                           gcTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCTTCCAGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCCACATGACCGTCAACGCAGCGCGCCCGGCTTTCAAGGAAGACTACTTCGAGCTg                                                                                         >  3:32800/2‑149 (MQ=255)                                                               ccAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTAcc                                                                                     >  4:72909/1‑149 (MQ=255)                                                                cAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCg                                                                                    <  6:9357/149‑1 (MQ=255)                                                                 aGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGc                                                                                                                  <  5:291072/118‑1 (MQ=255)                                                                 aGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGc                                                                                                                  >  6:291072/1‑118 (MQ=255)                                                                        cAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCtata                                                                            >  6:327405/1‑149 (MQ=255)                                                                          aCGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATc                                                                          >  8:285008/1‑149 (MQ=255)                                                                          aCGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATc                                                                          <  1:29426/149‑1 (MQ=255)                                                                          aCGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATc                                                                          <  5:62336/149‑1 (MQ=255)                                                                                 cGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAAcgc                                                                   <  1:153889/149‑1 (MQ=255)                                                                                             cATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATg                                                       <  4:18702/149‑1 (MQ=255)                                                                                              aTCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATgg                                                      <  5:165861/149‑1 (MQ=255)                                                                                                  cggcggCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGAc                                                  <  3:75999/149‑1 (MQ=255)                                                                                                  cggcggCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGAc                                                  <  7:50637/149‑1 (MQ=255)                                                                                                                    ccAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCcgc                                <  3:356034/149‑1 (MQ=255)                                                                                                                    ccAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCcgc                                >  1:55405/1‑149 (MQ=255)                                                                                                                               cagcGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTc                     >  7:148445/1‑149 (MQ=255)                                                                                                                                   gTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCAcc                 <  7:285008/149‑1 (MQ=255)                                                                                                                                         tACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTg           <  8:245425/149‑1 (MQ=255)                                                                                                                                            tCAAACGTAACGCCTACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTATTCCACCTTCCTGGTa        >  2:162761/1‑149 (MQ=255)                                                                                                                                            tCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTa        >  6:105203/1‑149 (MQ=255)                                                                                                                                            tCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTa        >  4:186735/1‑149 (MQ=255)                                                                                                                                            tCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTa        >  4:214277/1‑149 (MQ=255)                                                                                                                                               aaCGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTAcgc     <  6:19482/149‑1 (MQ=255)                                                                                                                                                  gTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGAc  >  3:30763/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   TACGCCGATTTGTCGGAAATGGGCTTTCGCCGCAGTGGCGACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGAC  >  NC_002947/4516256‑4516549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.