New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4516403 =	43 (0.710)	3 (0.050)	3/252	NT	7.2%	coding (268/708 nt)	ate	arginyl‑tRNA‑‑protein transferase
	?	NC_002947	4516441 =	37 (0.650)					coding (306/708 nt)	ate	arginyl‑tRNA‑‑protein transferase

GACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTCTGCTGGTTCTACGAGTTTCGCCTGGAAGG  >  NC_002947/4516295‑4516587                                                                                                                                                   |                                                                                                                                                   tcgcgtaccaggaaggtggaaaactgatcgcggctgggcgggtacatgtcgccatcggcgtggcgcgtttcgatatagcgccggtacagctcgaagtactcttccttgAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCaa                                                                                                                                                  >  1:52247‑M1/109‑149 (MQ=255) gACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTACCCGCAGCGCGCCCGGCGTTc                                                                                                                                                    >  1:327018/1‑147 (MQ=255)     gtaccaggaaggtggaaaactgatcgcggctgggcgggtacatgtcgccatcggcgtggcgcgtttcgatatagcgccggtacagctcgaagtactcttccttgAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGaa                                                                                                                                              >  5:97487‑M1/105‑149 (MQ=255)      ccTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAag                                                                                                                                             <  8:48725/149‑1 (MQ=255)       cTGTACCGGCCACACTGCCAGAACTGCAACGCCTGCGTGCCTGCGCGCATCCCGGCGGCGAGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAaga                                                                                                                                            <  6:318617/149‑1 (MQ=255)       cTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCGGGCGTTCAAGGAaga                                                                                                                                            <  8:346995/149‑1 (MQ=255)       cTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGaa                                                                                                                                              >  3:190984/1‑147 (MQ=255)          tACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAagag                                                                                                                                           <  6:372236/147‑1 (MQ=255)            ccGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACt                                                                                                                                       >  7:21667/1‑149 (MQ=255)               cccACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCg                                                                                                                                    <  8:21667/149‑1 (MQ=255)                  acacTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGc                                                                                                                                 <  3:237667/149‑1 (MQ=255)                    gcTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCTTCCAGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCCACATGACCGTCAACGCAGCGCGCCCGGCTTTCAAGGAAGACTACTTCGAGCTg                                                                                                                               >  3:32800/2‑149 (MQ=255)                        ccAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTAcc                                                                                                                           >  4:72909/1‑149 (MQ=255)                         cAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCg                                                                                                                          <  6:9357/149‑1 (MQ=255)                                 cAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCtata                                                                                                                  >  6:327405/1‑149 (MQ=255)                                   aCGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATc                                                                                                                >  8:285008/1‑149 (MQ=255)                                   aCGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATc                                                                                                                <  5:62336/149‑1 (MQ=255)                                   aCGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATc                                                                                                                <  1:29426/149‑1 (MQ=255)                                          cGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAAcgc                                                                                                         <  1:153889/149‑1 (MQ=255)                                                      cATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATg                                                                                             <  4:18702/149‑1 (MQ=255)                                                       aTCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATgg                                                                                            <  5:165861/149‑1 (MQ=255)                                                           cggcggCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGAc                                                                                        <  7:50637/149‑1 (MQ=255)                                                           cggcggCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGAc                                                                                        <  3:75999/149‑1 (MQ=255)                                                                             ccAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCcgc                                                                      <  3:356034/149‑1 (MQ=255)                                                                             ccAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCcgc                                                                      >  1:55405/1‑149 (MQ=255)                                                                                        cagcGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTc                                                           >  7:148445/1‑149 (MQ=255)                                                                                            gTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCAcc                                                       <  7:285008/149‑1 (MQ=255)                                                                                                  tACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTg                                                 <  8:245425/149‑1 (MQ=255)                                                                                                     tCAAACGTAACGCCTACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTATTCCACCTTCCTGGTa                                              >  2:162761/1‑149 (MQ=255)                                                                                                     tCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTa                                              >  6:105203/1‑149 (MQ=255)                                                                                                     tCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTa                                              >  4:186735/1‑149 (MQ=255)                                                                                                     tCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTa                                              >  4:214277/1‑149 (MQ=255)                                                                                                      ttccttgaacgccgggcgcgctgcggttacggtcaggtcggcgttCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTAc                                             >  5:97487‑M2/46‑149 (MQ=255)                                                                                                        aaCGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTAcgc                                           <  6:19482/149‑1 (MQ=255)                                                                                                          ttgaacgccgggcgcgctgcggttacggtcaggtcggcgttCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGa                                         >  1:52247‑M2/42‑149 (MQ=255)                                                                                                           gTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGAc                                        >  3:30763/1‑149 (MQ=255)                                                                                                             aacgccgggcgcgctgcggttacggtcaggtcggcgttCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGAcc                                       <  6:97487‑M2/110‑1 (MQ=255)                                                                                                                 CCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCg                                  <  2:297073‑M1/149‑1 (MQ=255)                                                                                                                         aCCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTctgc                            <  4:190984/147‑1 (MQ=255)                                                                                                                          ccGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTCTGCTgg                         <  3:72909/149‑1 (MQ=255)                                                                                                                             tAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTCTGCTGGTTc                      >  7:233541/1‑149 (MQ=255)                                                                                                                                ccGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTCTGCTGGTTCTAc                   <  3:214277/149‑1 (MQ=255)                                                                                                                                  gCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTCTGCTGGTTCTACGa                 <  5:327405/149‑1 (MQ=255)                                                                                                                                    aGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGAGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTCTGCTGGTTCTACGAGt               >  8:192736/1‑149 (MQ=255)                                                                                                                                      agcgcCAGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGTCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGACGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTCTGCTGGTTCTACGAGttt             <  4:32800/148‑1 (MQ=255)                                                                                                                                                 ttCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCAATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTCTGCTGGTTCTACGAGTTTCGCCTGGAAgg  >  3:322683‑M2/3‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                   GACCACCTGTACCGCCCACACTGCCAGAACTGCAACGCCTGCGTGCCGGCGCGCATCCCGGCGGCGCGCTTCATCCCCAACCGCCAGCAGCGTCGCATACTCAAACGTAACGCCGACCTGACCGTAACCGCAGCGCGCCCGGCGTTCAAGGAAGAGTACTTCGAGCTGTACCGGCGCTATATCGAAACGCGCCACGCCGATGGCGACATGTACCCGCCCAGCCGCGATCAGTTTTCCACCTTCCTGGTACGCGACCTGCCGTTCTGCTGGTTCTACGAGTTTCGCCTGGAAGG  >  NC_002947/4516295‑4516587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.