New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4604411 =61 (1.010)3 (0.050) 3/250 NT 5.3% coding (241/411 nt) PP_4076 hypothetical protein
?NC_002947 4604450 = 49 (0.870)coding (280/411 nt) PP_4076 hypothetical protein

AAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGACAC  >  NC_002947/4604264‑4604557
                                                                                                                                                   |                                                                                                                                                    
cttcagtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCg                                                                                                                                                     <  8:39115‑M1/2‑1 (MQ=255)
cttcagtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCg                                                                                                                                                     <  6:361611‑M1/2‑1 (MQ=255)
 ttcagtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCG‑‑c                                                                                                                                                  <  3:194025‑M1/3‑1 (MQ=255)
 ttcagtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCG‑‑c                                                                                                                                                  <  3:305963‑M1/3‑1 (MQ=255)
   tGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑Ctt                                                                                                                                                <  5:196288/149‑1 (MQ=255)
    agtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttggcctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCG‑‑Cttt                                                                                                                                               <  6:151642‑M1/6‑1 (MQ=255)
    agtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCG‑‑Cttt                                                                                                                                               >  6:183708‑M1/144‑149 (MQ=255)
    agtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCG‑‑Cttt                                                                                                                                               <  3:287627‑M1/6‑1 (MQ=255)
     gtgacatgggtcacctcactcgggtgtagcggttgtgtccgtttactagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCG‑‑CTTTg                                                                                                                                              <  6:365732‑M1/7‑1 (MQ=255)
     ccACCGCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTg                                                                                                                                              >  7:335045/1‑149 (MQ=255)
           cGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGAGATCCGCCGTACCCTCCAGCG‑‑CTTTGAACcgc                                                                                                                                        >  3:223737/1‑149 (MQ=255)
                 gTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCGCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATcc                                                                                                                                  <  4:307566/149‑1 (MQ=255)
                  ttGCTGAACGCGCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCa                                                                                                                                 >  4:132020/1‑149 (MQ=255)
                    gCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCAc                                                                                                                                <  6:71991/148‑1 (MQ=255)
                     cTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGt                                                                                                                              >  8:273559/1‑149 (MQ=255)
                       gAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTgc                                                                                                                            >  1:366023/1‑149 (MQ=255)
                             tCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTgcgcgcgc                                                                                                                      >  4:283057/1‑149 (MQ=255)
                               gCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCt                                                                                                                     >  6:116426/1‑148 (MQ=255)
                               gCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTc                                                                                                                    <  6:359326/149‑1 (MQ=255)
                                    ggTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGc                                                                                                               <  7:139832/149‑1 (MQ=255)
                                     gTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCg                                                                                                              >  5:249254/1‑149 (MQ=255)
                                     gTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCAGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCg                                                                                                              >  1:365543/1‑149 (MQ=255)
                                      ttGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCgg                                                                                                             <  4:28400/149‑1 (MQ=255)
                                          tCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCGTTGTTTGAACCGCGCAACCACGTGCGCGCGCACAAAgggggc                                                                                                           >  1:311645/1‑147 (MQ=21)
                                           cccAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCg                                                                                                        >  6:321213/1‑149 (MQ=255)
                                           cccAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCg                                                                                                        >  7:114116/1‑149 (MQ=255)
                                            cgtttaccagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCg                                                                                                        >  6:63338‑M1/104‑148 (MQ=255)
                                            ccAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCg                                                                                                        <  3:259825/148‑1 (MQ=255)
                                               gagCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGAtt                                                                                                    <  8:114116/149‑1 (MQ=255)
                                                 gcagcCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGt                                                                                                  <  7:273559/149‑1 (MQ=255)
                                                   cagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCg                                                                                                              >  3:79333‑M1/97‑135 (MQ=255)
                                                   cagcagctcaagctgcaactgctctgcctggttgttgacctgcacctggcagtcgagcctgaaatgcagttccaacggggcgtgacaatccggtacCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCg                                                                                                              <  4:79333‑M1/39‑1 (MQ=255)
                                                   agcCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCa                                                                                                <  6:28075/149‑1 (MQ=255)
                                                    gcCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCAc                                                                                               <  3:132020/149‑1 (MQ=255)
                                                    gcCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCAc                                                                                               <  3:283057/149‑1 (MQ=255)
                                                     caccGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGAAGCAACTGAGCGCCGATATCCGCCGTACCCTCCAGCT‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGAGGTAACGGAATGTCACg                                                                                              >  2:74631/3‑149 (MQ=25)
                                                       ccGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCaaa                                                                                                                 >  1:156773/1‑128 (MQ=255)
                                                       ccGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCaaa                                                                                                                 <  2:156773/128‑1 (MQ=255)
                                                         gAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGTGCATCCACGTGCGCGCGCTCAAAGCGGTACCg                                                                                                        <  4:96743/135‑1 (MQ=255)
                                                         gAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGAGCATCCACGTGCGCGCGCTCAAAGCGGTACCg                                                                                                        >  3:96743/1‑135 (MQ=255)
                                                            cTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGtt                                                                                       <  2:366023/149‑1 (MQ=255)
                                                               ggCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTgg                                                                                     >  6:250436/1‑148 (MQ=255)
                                                                gCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGaa                                                                                   <  6:207592/149‑1 (MQ=255)
                                                                     cgcgACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGc                                                                               <  8:335045/148‑1 (MQ=255)
                                                                     cgcgACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCa                                                                              <  1:74631/149‑1 (MQ=255)
                                                                     cgcgACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCa                                                                              <  7:318007/149‑1 (MQ=255)
                                                                          cTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCa                                                                         <  3:179855/149‑1 (MQ=255)
                                                                           ttCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAg                                                                        >  1:91118/1‑149 (MQ=255)
                                                                              aaCGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCt                                                                     >  1:94426/1‑149 (MQ=255)
                                                                                     aTGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGc                                                              <  1:184764/149‑1 (MQ=255)
                                                                                        aCGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAg                                                           <  6:249254/149‑1 (MQ=255)
                                                                                                    gcgACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAGCTGCATTTCAGGCTCGACTGCCAGGTGCAGGTcaa                                                >  5:361611/1‑148 (MQ=255)
                                                                                                    gcgACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTcaa                                                >  4:82105/1‑148 (MQ=255)
                                                                                                     cgACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTAcc                                                                                                         <  4:15618/90‑1 (MQ=255)
                                                                                                     cgACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTAcc                                                                                                         >  3:15618/1‑90 (MQ=255)
                                                                                                     cgACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTcaaca                                              <  4:263069/149‑1 (MQ=255)
                                                                                                       aCCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCaacaac                                            <  5:116426/149‑1 (MQ=255)
                                                                                                            ctgcAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAgg                                        >  1:20127/1‑148 (MQ=255)
                                                                                                            ctgcAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAgg                                        >  2:172718/1‑148 (MQ=255)
                                                                                                                agcaAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCagag                                   <  5:321213/149‑1 (MQ=255)
                                                                                                                         gcgcCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGATCCGCGCATCCACGTGCGCGCGCTCAAAGCTGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAg                          <  3:128647/149‑1 (MQ=255)
                                                                                                                           gcCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCt                        >  4:194025/1‑149 (MQ=255)
                                                                                                                            ccGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGTAGGTCAACAACCAGGCAGAGCAGtt                              <  6:344335/142‑1 (MQ=255)
                                                                                                                            ccGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGTAGGTCAACAACCAGGCAGAGCAGtt                              >  5:344335/1‑142 (MQ=255)
                                                                                                                                  tCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAgctg                 >  7:230631/1‑149 (MQ=255)
                                                                                                                                  tCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAgct                  <  2:94426/148‑1 (MQ=255)
                                                                                                                                     gccgTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCTAAGCGGTACCGGATTGTCACGCCCCGTTGGAAGTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGctgctg              <  2:365543/149‑1 (MQ=255)
                                                                                                                                     gccgTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGctgctg              >  7:39115/1‑149 (MQ=255)
                                                                                                                                      ccgTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTCAAgctgcaac             <  2:91118/149‑4 (MQ=255)
                                                                                                                                       cgTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGt            <  5:250436/149‑1 (MQ=255)
                                                                                                                                            ccTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGctgctg              >  7:266089/1‑142 (MQ=255)
                                                                                                                                            ccTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGctgctg              <  8:266089/142‑1 (MQ=255)
                                                                                                                                             cTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACgg      <  1:374526/149‑1 (MQ=255)
                                                                                                                                              tCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGCCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGa     >  5:151642/1‑149 (MQ=255)
                                                                                                                                                cAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGa     <  4:223737/147‑1 (MQ=255)
                                                                                                                                                  gcg‑‑cTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGacac  >  5:55789/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AAGTGCCACCTCGAAACGTTGCTGAACGCTCGCCAAGGTTGCTCCCAGAGCAGCCCCGAGCTGGGCCTGCGCGACTTCAACGGGCATGACGTCAGCAGCGGCGACCTGCTGCAGCAAGTGAGCGCCGATATCCGCCGTACCCTCCAGCG‑‑CTTTGAACCGCGCATCCACGTGCGCGCGCTCAAAGCGGTACCGGATTGTCACGCCCCGTTGGAACTGCATTTCAGGCTCGACTGCCAGGTGCAGGTCAACAACCAGGCAGAGCAGTTGCAGCTTGAGCTGCTGGTAAACGGACAC  >  NC_002947/4604264‑4604557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.