New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4612747 =	69 (1.150)	5 (0.090)	5/252	NT	7.8%	intergenic (+1709/‑398)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein
	?	NC_002947	4612807 =	53 (0.930)					intergenic (+1769/‑338)	hcpC‑II/PP_4084	hemolysin‑coregulated protein/hypothetical protein

CCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCAACACGCTACGCCTCAAGTGC  >  NC_002947/4612599‑4612893                                                                                                                                                     |                                                                                                                                                   tgaaggtctcgcaggtgatgttcagcgtgccattggcatgcatttcgataagggtcttgccgcacttgaggcgtagcgtgttgcccgcttcgacttcgtagtcgcgtgcgatgaggtcgtttttgccaccccccactttcaaggtgtcg                                                                                                                                                    <  8:330309‑M1/1‑1 (MQ=255) ccAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAgg                                                                                                                                                    >  4:151029/1‑149 (MQ=255)    gACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTg                                                                                                                                                 <  1:139750/149‑1 (MQ=255)    gACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTg                                                                                                                                                 <  1:37997/149‑1 (MQ=255)    gACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTg                                                                                                                                                 <  6:222041/149‑1 (MQ=255)     ggtctcgcaggtgatgttcagcgtgccattggcatgcatttcgataagggtcttgccgcacttgaggcgtagcgtgttgcccgcttcgacttcgtagtcgcctgcgatgaggtcgtttttgccaccccccactttcaaggtgtcGTTgg                                                                                                                                                <  5:238838‑M1/5‑1 (MQ=255)       tctcgcaggtgatgttcagcgtgccattggcatgcatttcgataagggtcttgccgcacttgaggcgtagcgtgttgcccgcttcgacttcgtagtcgcctgcgatgaggtcgtttttgccaccccccactttcaaggtgtcGTTGGcc                                                                                                                                              <  5:349296‑M1/7‑1 (MQ=255)        cacaAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGc                                                                                                                                               >  3:102854/1‑147 (MQ=255)             gggggAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGAc                                                                                                                                         >  4:325771/1‑148 (MQ=255)                      tttCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAAt                                                                                                                                     >  8:331978/1‑143 (MQ=255)                      tttCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAAt                                                                                                                                     <  7:331978/143‑1 (MQ=255)                      tttCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCg                                                                                                                               >  5:348249/1‑149 (MQ=255)                          aaCGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCAt                                                                                                                           >  6:272391/1‑149 (MQ=255)                          aaCGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCAt                                                                                                                           <  3:151029/149‑1 (MQ=255)                           aCGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTg                                                                                                                                                 <  6:34118/126‑1 (MQ=255)                           aCGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTg                                                                                                                                                 >  5:34118/1‑126 (MQ=255)                            cGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTg                                                                                                                         <  3:243797/149‑1 (MQ=255)                             gAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTgg                                                                                                                        <  1:342999/149‑1 (MQ=255)                                        cGAGGATGAGCTGTGCAAGGAGGAAGTGTTCATCCATTGCCAGAGAGATCAGAACACTCTGGTCATTGACAACCAGTCCCTCTCTGCGGGCGTGTATCGCACGCAACAGGTTGGCCAGGAGGAATCGGTCGCCATTTGCCGCAATCGt                                                                                                              <  3:66879/148‑1 (MQ=255)                                        cGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTc                                                                                                             >  7:206470/1‑149 (MQ=255)                                         gAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTc                                                                                                             <  8:206470/148‑1 (MQ=255)                                          atttcgataagggtcttgccgcacttgaggcgtagcgtgttgcccgcttcgacttcgtagtcgcctgcgatgaggtcgtttttgccaccccccactttcaaggtgtcGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTg                                                                                                           <  8:217127‑M1/42‑1 (MQ=255)                                             tctctcTGGGCATGGAAGAACACTTCCTCCTTGCCCAGAGAGATCAGAACACTCAGGTCAATCACAACCAGTCCCTCTCTGTGGGCCTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATAGGCCGCAATCGTCTgcgc                                                                                                        >  8:215102/6‑149 (MQ=255)                                                aGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGcgtc                                                                                                     <  6:238844/149‑1 (MQ=255)                                                   tGGGCATGGATGAACACTTCCTCCTTGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGcgtcgt                                                                                                   >  5:285299/1‑148 (MQ=255)                                                    gggtcttgccgcacttgaggcgtagcgtgttgcccgcttcgacttcgtagtcgcctgcgatgaggtcgtttttgccaccccccactttcaaggtgtcGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCgtcgtc                                                                                                  <  7:166896‑M1/51‑1 (MQ=255)                                                       cAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAgg                                                                                              <  6:348249/149‑1 (MQ=255)                                                       cAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAgg                                                                                              >  3:21097/1‑149 (MQ=255)                                                           gccgcacttgaggcgtagcgtgttgcccgcttcgacttcgtagtcgcctgcgatgaggtcgtttttgccaccccccactttcaaggtgtcGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGcc                                                                                            >  7:217127‑M1/91‑147 (MQ=255)                                                            ccgcacttgaggcgtagcggttagcccgcttcgacttcgtagtcgcctgcgatgaggtcgtttatgccaccccccactttcaaggtgtcGTTGGCCAGGACGAATCGGGCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCaa                                                                                          >  1:141663‑M1/90‑148 (MQ=255)                                                            aggaAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAAc                                                                                         >  1:24476/1‑149 (MQ=255)                                                             ggaAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGACGCCATTGGCCGCAATCGTCTGCGCTTCGTCAAGGCCAACg                                                                                        >  7:128846/1‑149 (MQ=255)                                                              gaAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGa                                                                                       >  4:215137/1‑149 (MQ=255)                                                                 gtgtTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCATCTCTGTGGGCGTCGATCGAACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATAGTCTGCGCCTCGTCAAGACCAACGacac                                                                                    >  5:294036/1‑149 (MQ=255)                                                                 cttgaggcgtagcgtgttgcccgcttcgacttcgtagtcgcctgcgatgaggtcgtttttgccaccccccactttcaaggtgtcGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGacac                                                                                    >  8:166896‑M1/85‑149 (MQ=255)                                                                       aTCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGa                                                                               <  3:215137/148‑1 (MQ=255)                                                                       aTCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGa                                                                               <  4:102854/148‑1 (MQ=255)                                                                       aTCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGa                                                                               >  1:331320/1‑148 (MQ=255)                                                                       aTCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGa                                                                               >  3:12210/1‑148 (MQ=255)                                                                       aTCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGa                                                                               <  5:272391/148‑1 (MQ=255)                                                                         ccATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCaa                                                                                                >  1:256728/1‑129 (MQ=255)                                                                         ccATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCaa                                                                                                <  2:256728/129‑1 (MQ=255)                                                                          cATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGt                                                                           >  7:189883/1‑149 (MQ=255)                                                                              cccAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTgggg                                                                       <  3:325771/149‑1 (MQ=255)                                                                               ccAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTggggg                                                                      >  7:330309/1‑149 (MQ=255)                                                                                cAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTgggggg                                                                     >  1:236799/1‑149 (MQ=255)                                                                                 agagagATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACCCCTTGAAAGTGGGGGGt                                                                    >  6:349296/1‑149 (MQ=255)                                                                                  gagagaTCAGAACACTCTGGTCAATCACAACCAGTCCCTCTGTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTg                                                                   <  5:322647/149‑1 (MQ=255)                                                                                  gagagaTCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTg                                                                   <  4:12210/149‑1 (MQ=255)                                                                                   agatttCAGAACTCTCTTGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCAGCCAACAGGTTGGCCAGTAGGAATCGGTGTCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGTCCAAGGACACCTTGAATGTGGGGGGTg                                                                   <  6:294036/143‑1 (MQ=255)                                                                                   agagaTCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTgg                                                                  >  3:108582/1‑149 (MQ=255)                                                                                           gAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGTGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACg                                                          >  2:41749/1‑149 (MQ=255)                                                                                           gAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAAc                                                           >  2:265745/1‑148 (MQ=255)                                                                                            aaCACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGa                                                         <  3:16517/149‑1 (MQ=255)                                                                                             acacTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGAc                                                        <  1:265745/149‑1 (MQ=255)                                                                                                 tctGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCa                                                    >  2:194150/1‑149 (MQ=255)                                                                                                  ctGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGac                                                                                      >  6:122027/1‑114 (MQ=255)                                                                                                  ctGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGac                                                                                      <  5:122027/114‑1 (MQ=255)                                                                                                  ctGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGa                                                         >  8:254308/1‑143 (MQ=255)                                                                                                  ctGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGa                                                         <  7:254308/143‑1 (MQ=255)                                                                                                     gTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATc                                                  <  2:24476/147‑1 (MQ=255)                                                                                                     gTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCg                                                 >  4:307949/1‑148 (MQ=255)                                                                                                        aaTCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAgg                                             >  7:311273/1‑149 (MQ=255)                                                                                                          tCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGa                                                         >  7:203610/1‑135 (MQ=255)                                                                                                          tCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGa                                                         <  8:203610/135‑1 (MQ=255)                                                                                                          tCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGc                                            >  3:43429/1‑148 (MQ=255)                                                                                                          tCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCg                                           >  4:86062/1‑149 (MQ=255)                                                                                                            acaACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTg                                                                                                           >  6:80995/1‑83 (MQ=255)                                                                                                            acaACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTg                                                                                                           <  5:80995/83‑1 (MQ=255)                                                                                                              aaCCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTa                                       >  2:90500/1‑149 (MQ=255)                                                                                                              aaCCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTa                                       <  8:189883/149‑1 (MQ=255)                                                                                                               aCCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTCGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTAc                                      <  8:128846/149‑1 (MQ=255)                                                                                                                ccAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACg                                     <  3:307949/149‑1 (MQ=255)                                                                                                                        tctctGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCg                               >  1:90182/1‑147 (MQ=255)                                                                                                                              tgGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCggg                        <  2:331320/148‑1 (MQ=255)                                                                                                                              tgGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGc                       <  1:194150/149‑1 (MQ=255)                                                                                                                              tgGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGc                       <  2:90182/149‑1 (MQ=255)                                                                                                                                ggCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCaa                     <  4:43429/149‑1 (MQ=255)                                                                                                                                   gTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACAACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCAacac                  >  1:369770/1‑149 (MQ=255)                                                                                                                                   gTCGATCGCACACAACAGGTTGGCCAGGACGCATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGTCCAACGACACATTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCAacac                  >  4:114704/1‑149 (MQ=255)                                                                                                                                          gCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCAACACGCTACGc           <  4:21097/149‑1 (MQ=255)                                                                                                                                           cACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCAACACGCTACGcc          >  6:238838/1‑149 (MQ=255)                                                                                                                                               cAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCAACACGCTACGCCTCaa      <  6:285299/149‑1 (MQ=255)                                                                                                                                                 aCAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCAACACGCTACGCCTCAAGt    <  1:90500/149‑1 (MQ=255)                                                                                                                                                   aGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCAACACGCTACGCCTCAAGTGc  <  2:236799/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CCAGACCCACAAGGGGGAAGGTTTCAACGAGCTGCGTTTCGAGGATGAGCTGGGCAAGGAGGAAGTGTTCATCCATGCCCAGAGAGATCAGAACACTCTGGTCAATCACAACCAGTCCCTCTCTGTGGGCGTCGATCGCACCCAACAGGTTGGCCAGGACGAATCGGTCGCCATTGGCCGCAATCGTCTGCGCGTCGTCAAGGCCAACGACACCTTGAAAGTGGGGGGTGGCAAAAACGACCTCATCGCAGGCGACTACGAAGTCGAAGCGGGCAACACGCTACGCCTCAAGTGC  >  NC_002947/4612599‑4612893

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.