New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5288394 =47 (0.780)8 (0.170) 7/206 NT 20.4% intergenic (‑75/+109) PP_4660/mdaB LysR family transcriptional regulator/drug activity modulator B
?NC_002947 5288488 = 26 (0.560)intergenic (‑169/+15) PP_4660/mdaB LysR family transcriptional regulator/drug activity modulator B

TCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTC  >  NC_002947/5288246‑5288541
                                                                                                                                                    |                                                                                                                                                   
ggccaaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccg                                                                                                                                                     <  1:25623‑M1/1‑1 (MQ=255)
  ccaaccatttgctgggcatgacgggcctgccgagcttcctgtctgtggatgtgatgaagcgcccggatgtgccggcggggttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGc                                                                                                                                                   >  4:186638‑M1/147‑149 (MQ=255)
   caaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGcc                                                                                                                                                  <  5:362049‑M1/4‑1 (MQ=255)
   caaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGcc                                                                                                                                                  <  6:144919‑M1/4‑1 (MQ=255)
    aaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGcc                                                                                                                                                  <  2:310471‑M1/4‑1 (MQ=255)
      gcagcGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCctct                                                                                                                                               <  5:193857/149‑1 (MQ=255)
       cagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCtt                                                                                                                                              >  7:308842‑M1/142‑149 (MQ=255)
            cctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTcgc                                                                                                                                           >  7:57091‑M1/137‑147 (MQ=255)
             ctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacaggaattttatgtctgtaccGGCCTCTTCGCggg                                                                                                                                        <  5:279007‑M1/14‑1 (MQ=255)
              aaTCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGc                                                                                                                                       <  5:82373/149‑1 (MQ=255)
               ggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccgaaatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCt                                                                                                                                      <  1:92278‑M1/16‑1 (MQ=255)
               aTCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCt                                                                                                                                      <  4:318044/149‑1 (MQ=255)
                 gcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgatggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCTCGGGCTTg                                                                                                                                    <  1:149189‑M1/18‑1 (MQ=255)
                       gCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCt                                                                                                                              >  2:287431/1‑149 (MQ=255)
                       gCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCt                                                                                                                              <  5:385283/149‑1 (MQ=255)
                        cAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTc                                                                                                                             <  6:225367/149‑1 (MQ=255)
                        cAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTc                                                                                                                             <  8:137259/149‑1 (MQ=255)
                         aGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCAAGCCCGcgaa                                                                                                                            <  6:217212/149‑4 (MQ=255)
                             tgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCca                                                                                                                          <  5:155874‑M1/28‑1 (MQ=255)
                             gATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTccc                                                                                                                           <  6:80062/146‑1 (MQ=255)
                             gATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTccc                                                                                                                           >  5:80062/1‑146 (MQ=255)
                                taCGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACCTCAGGGCCTGAGGTTGGTCTGTGCAAGGCTTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACCAg                                                                                                                      >  5:259759/2‑148 (MQ=255)
                                   ggCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACt                                                                                                                  >  3:280766/1‑149 (MQ=255)
                                   ggCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACt                                                                                                                  >  4:131287/1‑149 (MQ=255)
                                     cgtagaATAACTGGTCTTCTTCGGTTCGGGTTTTCACCTCAGGGCCTGTTGTTGGTCGGTGCAAGGATTAGATAACCGCTTGGCGCCGCCAACGCCACCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGc                                                                                                                <  1:118786/145‑1 (MQ=37)
                                       acgaATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTCCGCGGGCTTGCCCGCTCCCACAAGTACTGCaa                                                                                                              <  8:248742/149‑1 (MQ=255)
                                        cgaATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGGCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCaaa                                                                                                             <  5:4173/149‑1 (MQ=255)
                                          aaTACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGAGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGt                                                                                                           >  3:298616/1‑149 (MQ=255)
                                               cTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCtt                                                                                                       >  5:277159/1‑148 (MQ=255)
                                                tGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGACCCCTCCCACAACTACTTCAAAGTCCTTg                                                                                                      >  5:203080/1‑148 (MQ=255)
                                                    gTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTACCGCTCCCACAAGTACTGCAAACTACTTGAAAc                                                                                                  >  5:304063/1‑148 (MQ=255)
                                                     ttcttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCt                                                                                                <  5:25221/149‑1 (MQ=255)
                                                       atgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGc                                                                                              <  7:202978‑M1/56‑1 (MQ=255)
                                                        ttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCg                                                                                             >  6:155874/1‑149 (MQ=255)
                                                           ggATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCCCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTaa                                                                                          >  4:71615/1‑149 (MQ=255)
                                                             aTCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCTCCCACAAGTACTGCAAAGTCCGTGAAACCTGCGTAAt                                                                                         >  6:134447/1‑148 (MQ=255)
                                                             aTCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATa                                                                                        <  4:46847/149‑1 (MQ=255)
                                                              gcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATAc                                                                                       >  3:73805‑M1/87‑149 (MQ=255)
                                                                       cacaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTTGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACt                                                                                                                  <  1:118497/113‑1 (MQ=255)
                                                                       cacaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACt                                                                                                                  >  2:118497/1‑113 (MQ=255)
                                                                        gccggcggcgttggcagcttatgaggcccatctggacaaggtggttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCGTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGc                                                                             >  8:300953‑M1/77‑149 (MQ=255)
                                                                        gccggcggcgttggcagcttatgaggcacatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCTGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGc                                                                             >  4:64812‑M1/77‑149 (MQ=255)
                                                                        acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTaa                                                                                          <  1:113019/136‑1 (MQ=255)
                                                                        acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTaa                                                                                          >  2:113019/1‑136 (MQ=255)
                                                                         ccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCg                                                                            >  8:202978‑M1/76‑149 (MQ=255)
                                                                         caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCAGCGTAATACCTGTGGGAGCg                                                                            >  7:12822/1‑149 (MQ=255)
                                                                           tCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCggg                                                                          >  4:239727/1‑149 (MQ=255)
                                                                            gcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGc                                                                         >  1:333082‑M1/73‑149 (MQ=255)
                                                                                     tggttggtCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCcg                                                                  <  2:239778/147‑1 (MQ=255)
                                                                                              tgtgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGAAAGCCCGCGAAGAGGCCg                                                       <  6:277159/149‑1 (MQ=255)
                                                                                               gtgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCg                                                                                             >  8:240625/1‑110 (MQ=255)
                                                                                               gtgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGGAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCgg                                                      >  5:309306/1‑149 (MQ=255)
                                                                                                  cAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTa                                                    >  4:278446/1‑148 (MQ=255)
                                                                                                   aaGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCg                                                                            <  3:352902/123‑1 (MQ=255)
                                                                                                   aaGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCg                                                                            >  4:352902/1‑123 (MQ=255)
                                                                                                         ggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTGATACCTGTGGGAGCGGGCa                                                                        <  3:252936‑M1/78‑1 (MQ=255)
                                                                                                         ggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTGATACCTGTGGGAGCGGGCa                                                                        >  4:252936‑M1/44‑121 (MQ=255)
                                                                                                               aCCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTCCCCGCTCCCACAAGTACTGAAAAGTCATTGAAACCTGCGTAATACCTGGGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTa                                      <  5:380160/149‑1 (MQ=255)
                                                                                                                  gCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCATGCCCCCTCCCCCCAGTACAGCAAAGTACTTTAAACCAGCCTAAAAACTGTGGGAGCCGGCAAGCCCGCGAATAGGCCGGGACCGACATAAAATTACtg                                   >  6:342019/1‑149 (MQ=255)
                                                                                                                        cGAGCCCACGCCCTGCGGCGCGTTTTTGGGCCTCTTCGCGGGCTTGCCGGCTCCCAAAAGTACTCAAATGTCTTTTAACCCTGCTTAATACCTGTGGTTGGGGGAAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCt                              <  6:309306/148‑1 (MQ=255)
                                                                                                                         gAGGCCAAGCCCAGCGGCGGCTGTAGGGGCCTGTTCGCGGGATTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAAAACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTg                            <  5:342019/149‑1 (MQ=38)
                                                                                                                              cAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATAACAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGGAAAGACAAAAAAATTCTGTGCCGTGCCaa                        >  4:108883/1‑148 (MQ=37)
                                                                                                                                  tCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCTCCCACAAGTAATGCAAAGTCCGTGAAAACAGGGTAAAAACTTTGGGAGAGGGCAAGCCCGGGAAGAGGCCCGTACAGACATAAAAATACTGTGCCTTGGCCAACAcc                   >  6:82626/1‑149 (MQ=255)
                                                                                                                                    ccgcggcgCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCACCCAAACGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGCGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCtt                 <  3:239727/147‑1 (MQ=255)
                                                                                                                                    cAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTACCACAAGTACTGCAAATTCCTTGCAACCGGGGGATTACCGGTGGGGGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACGGTGGCTTGCCaacccccat                 >  2:219276/1‑142 (MQ=37)
                                                                                                                                    cAGCGGCGCCGGTAGGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCtt                 <  3:108883/149‑1 (MQ=255)
                                                                                                                                                tATGCGCCTCTTCGCGTGCTTGCCCGCCCCCACAATAACAGCAAAGTCCTTGAAACGTGCGTAATACCTGGGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATgg       <  5:82626/147‑1 (MQ=37)
                                                                                                                                                    GGCCGCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGGCCTTGAAACCTGCGTAAAACCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTc  >  5:134447‑M1/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTC  >  NC_002947/5288246‑5288541

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.