New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5288394 =47 (0.780)8 (0.170) 7/206 NT 20.4% intergenic (‑75/+109) PP_4660/mdaB LysR family transcriptional regulator/drug activity modulator B
?NC_002947 5288488 = 26 (0.560)intergenic (‑169/+15) PP_4660/mdaB LysR family transcriptional regulator/drug activity modulator B

TGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTGGCC  >  NC_002947/5288340‑5288635
                                                                                                                                                    |                                                                                                                                                    
tgtgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGAAAGCCCGCGAAGAGGCCg                                                                                                                                                      <  6:277159/149‑1 (MQ=255)
 gtgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGGAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCgg                                                                                                                                                     >  5:309306/1‑149 (MQ=255)
    cAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTa                                                                                                                                                   >  4:278446/1‑148 (MQ=255)
                 aCCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTCCCCGCTCCCACAAGTACTGAAAAGTCATTGAAACCTGCGTAATACCTGGGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTa                                                                                                                                     <  5:380160/149‑1 (MQ=255)
                    gCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCATGCCCCCTCCCCCCAGTACAGCAAAGTACTTTAAACCAGCCTAAAAACTGTGGGAGCCGGCAAGCCCGCGAATAGGCCGGGACCGACATAAAATTACtg                                                                                                                                  >  6:342019/1‑149 (MQ=255)
                          cGAGCCCACGCCCTGCGGCGCGTTTTTGGGCCTCTTCGCGGGCTTGCCGGCTCCCAAAAGTACTCAAATGTCTTTTAACCCTGCTTAATACCTGTGGTTGGGGGAAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCt                                                                                                                             <  6:309306/148‑1 (MQ=255)
                           gAGGCCAAGCCCAGCGGCGGCTGTAGGGGCCTGTTCGCGGGATTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAAAACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTg                                                                                                                           <  5:342019/149‑1 (MQ=38)
                                cAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATAACAGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGGAAAGACAAAAAAATTCTGTGCCGTGCCaa                                                                                                                       >  4:108883/1‑148 (MQ=37)
                                    tCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTTCCCGCTCCCACAAGTAATGCAAAGTCCGTGAAAACAGGGTAAAAACTTTGGGAGAGGGCAAGCCCGGGAAGAGGCCCGTACAGACATAAAAATACTGTGCCTTGGCCAACAcc                                                                                                                  >  6:82626/1‑149 (MQ=255)
                                      ccgcggcgCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCACCCAAACGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGCGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCtt                                                                                                                <  3:239727/147‑1 (MQ=255)
                                      cAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTACCACAAGTACTGCAAATTCCTTGCAACCGGGGGATTACCGGTGGGGGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACGGTGGCTTGCCaacccccat                                                                                                                >  2:219276/1‑142 (MQ=37)
                                      cAGCGGCGCCGGTAGGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCtt                                                                                                                <  3:108883/149‑1 (MQ=255)
                                                  tATGCGCCTCTTCGCGTGCTTGCCCGCCCCCACAATAACAGCAAAGTCCTTGAAACGTGCGTAATACCTGGGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATgg                                                                                                      <  5:82626/147‑1 (MQ=37)
                                                      GGCCGCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGGCCTTGAAACCTGCGTAAAACCGGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTc                                                                                                 >  5:134447‑M1/1‑148 (MQ=255)
                                                       GCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGGGTAATACCTGTGGGAGCGGGCAAGCCCGCGCAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCa                                                                                                <  6:362049‑M1/148‑1 (MQ=255)
                                                            TTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCt                                                                                          >  3:71615‑M1/1‑149 (MQ=255)
                                                              CGCGGCCTTGCCCGCTCCCACCATTACTCCAACGTCCTTGAAACCGGCTTATTCCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCt                                                                                          >  8:12822‑M1/1‑147 (MQ=255)
                                                               GCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTAc                                                                                                                                                  <  2:87206‑M1/90‑1 (MQ=255)
                                                               GCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTAc                                                                                                                                                  >  1:87206‑M1/1‑90 (MQ=255)
                                                               GCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGc                                                                                        <  4:260986‑M1/148‑1 (MQ=255)
                                                               GCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGc                                                                                        <  5:144919‑M1/148‑1 (MQ=255)
                                                                      tgcccgctcccacaggtatcacgcaggtttcaaggactttgcagtacttgtgggagcgggcaagcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTcc                                                                                                            >  4:252936‑M2/79‑121 (MQ=255)
                                                                      tgcccgctcccacaggtatcacgcaggtttcaaggactttgcagtacttgtgggagcgggcaagcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTcc                                                                                                            <  3:252936‑M2/43‑1 (MQ=255)
                                                                       gcccgctcccacaggtattacgcaggtttcaaggactttgcagtacttgtgggagcgggcaagcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAAcgccgc                                                                               >  1:333082‑M2/78‑149 (MQ=255)
                                                                          cgctcccacaggtattacgcaggtttcaaggactttgcagtacttgtgggagcgggcaagcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCgg                                                                            >  8:202978‑M2/75‑149 (MQ=255)
                                                                          CGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCAtacaggcgc                                                                                                                                            <  5:60894‑M1/85‑5 (MQ=255)
                                                                          CGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCCAtacaggcgc                                                                                                                                            >  6:60894‑M1/1‑81 (MQ=255)
                                                                           gctcccacaggtattacgcaggtttcaaggactttgcagtacttgtgggagcgggcacgcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAACCACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGc                                                                           >  8:300953‑M2/74‑149 (MQ=255)
                                                                           gctcccacaggtattacgcaggtttcaaggactttgcagtacttgtgggagcgggcaagccagcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGTGCCTCATAAGCTGCCAACGCCGCCGGc                                                                           >  4:64812‑M2/74‑149 (MQ=255)
                                                                               CCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACgccgcc                                                                              <  2:214910‑M1/142‑1 (MQ=255)
                                                                               CCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACgccgcc                                                                              >  1:214910‑M1/1‑142 (MQ=255)
                                                                                 ACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACGTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGACTCATAAGCTGCCAACGCCGCCGGCAAATcc                                                                    <  5:366442‑M1/149‑1 (MQ=255)
                                                                                  CAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGCCATAAAATTACTGTGCCTTGCCAAACACCTTGTCCCGCTGGTCCTCATACGCTGCCAACGCCGCCGGCACATCCg                                                                   <  6:279007‑M1/149‑1 (MQ=255)
                                                                                  CAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCg                                                                   <  8:6503‑M1/149‑1 (MQ=255)
                                                                                   acgaccTGAAAAGCCCTTGAAACCTGCTAAATCCCTGGGGCCGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCgg                                                                  <  3:131287/144‑1 (MQ=38)
                                                                                     gtattacgcaggtttcaaggactttgcagtacttgtgggagcgggcaagcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGgc                                                                >  3:73805‑M2/64‑149 (MQ=255)
                                                                                         tGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCtt                                                            >  3:327119/1‑149 (MQ=255)
                                                                                         tGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCtt                                                            >  1:238607/1‑149 (MQ=255)
                                                                                         tGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCtt                                                            >  1:182898/1‑149 (MQ=255)
                                                                                           cAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtc                                                           <  3:278446/148‑1 (MQ=255)
                                                                                           cAAAGACCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtca                                                          >  6:129969/1‑149 (MQ=255)
                                                                                            gcaggtttcaaggactttgcagtacttgtgggagcgggcaagcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtcat                                                         <  7:202978‑M2/93‑1 (MQ=255)
                                                                                            aaaGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtcat                                                         <  2:238607/149‑1 (MQ=255)
                                                                                               gTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATcac                                                      <  7:6503/149‑1 (MQ=255)
                                                                                                  cTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtca                                                          <  4:321698/142‑1 (MQ=255)
                                                                                                  cTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTtca                                                          >  3:321698/1‑142 (MQ=255)
                                                                                                   ttGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATaa                                                                                             >  2:341465/1‑107 (MQ=255)
                                                                                                   ttGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATaa                                                                                             <  1:341465/107‑1 (MQ=255)
                                                                                                   ttGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGACCAGATGGGCCTCATAAGCTCCCAAAGCCGCCGGCACATCCGAGCGCTTCATCACATca                                                  >  8:261474/1‑148 (MQ=255)
                                                                                                    tGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCca                                                 >  2:25623/1‑149 (MQ=255)
                                                                                                     gAAACCTGCGTAATAAATGTGGGAGCGGGCAAGCCCACCAAGAGAACAGTACAGACATAAAATTACTGTGCCTTGACAAACACATTGTCCAGATGGGAATCATAAGCTGCCAACGCCGCCGCCACATCCGGGAGCTAGATCACATAca                                                 >  2:149189/1‑148 (MQ=255)
                                                                                                           tGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAg                                          >  1:310471/1‑149 (MQ=255)
                                                                                                                 aTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAg                                          <  6:187833/143‑1 (MQ=255)
                                                                                                                 aTACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAg                                          >  5:187833/1‑143 (MQ=255)
                                                                                                                  tACCTGTGGGAGGGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTc                                   <  5:227046/149‑1 (MQ=255)
                                                                                                                  tACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTc                                   <  1:25393/149‑1 (MQ=255)
                                                                                                                   aCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCg                                  >  2:92278/1‑149 (MQ=255)
                                                                                                                    ccTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCgg                                 >  5:369719/1‑149 (MQ=255)
                                                                                                                     cTGTGGGAGCGGGCAAGCCAGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCgg                                 >  8:342999/1‑148 (MQ=255)
                                                                                                                        tgggagcgggcaagcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCa                               <  5:155874‑M2/119‑1 (MQ=255)
                                                                                                                                  caagcccgagaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCATCGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGc                   <  1:149189‑M2/131‑1 (MQ=255)
                                                                                                                                    agcccgcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATTTCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGcc                  <  1:92278‑M2/133‑1 (MQ=255)
                                                                                                                                      cccgcgaagaggccGGTACAGACATAAAATTCCTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAg               <  5:279007‑M2/135‑1 (MQ=255)
                                                                                                                                         gcgaagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAgg              >  7:57091‑M2/12‑147 (MQ=255)
                                                                                                                                            aagaggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTg         >  7:308842‑M2/9‑149 (MQ=255)
                                                                                                                                                ggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGtt      <  2:310471‑M2/144‑1 (MQ=255)
                                                                                                                                                ggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTg     <  6:144919‑M2/145‑1 (MQ=255)
                                                                                                                                                ggccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTg     <  5:362049‑M2/145‑1 (MQ=255)
                                                                                                                                                 gccGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACCCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGACAGGAAGCTCGGCAGGCCCGTCATGCCCAGCAAATGGTTgg    >  4:186638‑M2/4‑149 (MQ=255)
                                                                                                                                                   cGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTGGcc  <  1:25623‑M2/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGGTACAGACATAAAATTACTGTGCCTTGCCAAACACCTTGTCCAGATGGGCCTCATAAGCTGCCAACGCCGCCGGCACATCCGGGCGCTTCATCACATCCACAGCCAGGAAGGTCGGCAGGCCGGTCATGCCCAGGAACTGGTTGGCC  >  NC_002947/5288340‑5288635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.