New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 563097 =78 (1.300)6 (0.100) 5/256 NT 7.4% coding (180/1002 nt) rpoA DNA‑directed RNA polymerase subunit alpha
?NC_002947 563131 = 76 (1.310)coding (214/1002 nt) rpoA DNA‑directed RNA polymerase subunit alpha

CGCGCCAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAGCTGGATCACGATG  >  NC_002947/562984‑563278
                                                                                                                                                   |                                                                                                                                                   
acccccgaaccctttttcgacaaggtcagcgtaacttcgtcacgaccatgcagtttgatagcgagacctttcaggttcaacaggatttcaattacgtcttcctgaacaccttcGATCGATGGCGTACTCCATGAGTACTCCGCGATCGa                                                                                                                                                    >  3:221726‑M1/114‑149 (MQ=255)
 gcgcCAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGaa                                                                                                                                                   <  5:64450/149‑1 (MQ=255)
  cgcCAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAg                                                                                                                                                  <  4:106409/149‑1 (MQ=255)
  ccccgaaccctttttcgacaaggtcagcgtaacttcgtcacgaccatgcagtttgatagcgagacctttcaggttcaacaggatttcaattacgtcttcctgaacaccttcGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAg                                                                                                                                                  >  5:245067‑M1/112‑149 (MQ=255)
   cccgaaccctttttcgacaaggtcagcgtaacttcgtcacgaccatgcagtttgatagcgagacctttcaggttcaacaggatttcaattacgtcttcctgaacaccttcGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAgg                                                                                                                                                 >  8:338254‑M1/111‑149 (MQ=255)
     cAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTCCTCCATGAGTACTCCGCGATCGATGgtg                                                                                                                                               >  8:251032/1‑149 (MQ=255)
     cAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGgtg                                                                                                                                               >  7:174096/1‑149 (MQ=255)
        caTTCCGCTCGAGCCTCTCGAGCGTGGTCTCGGCCATACCCTCGGCAACGCGCTGCGCCGCACCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTc                                                                                                                                            <  8:174096/148‑1 (MQ=255)
          ttACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAg                                                                                                                                          <  4:118233/149‑1 (MQ=255)
           tACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAg                                                                                                                                          >  6:352639/1‑148 (MQ=255)
             cGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGaa                                                                                                                                       <  4:266190/149‑1 (MQ=255)
             cGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGaa                                                                                                                                       <  8:286186/149‑1 (MQ=255)
              gCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAgg                                                                                                                                         >  8:153494/1‑146 (MQ=255)
                tCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGAc                                                                                                                                    >  8:265104/1‑149 (MQ=255)
                tCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGAc                                                                                                                                    >  6:224937/1‑149 (MQ=255)
                           gAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGaa                                                                                                                           <  5:305424/147‑1 (MQ=255)
                             gCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATcc                                                                                                                       >  3:133491/1‑149 (MQ=255)
                                tGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGt                                                                                                                    <  8:353869/149‑1 (MQ=255)
                                  gTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGtt                                                                                                                   <  5:224937/148‑1 (MQ=255)
                                   tttCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTg                                                                                                                  >  6:118622/1‑148 (MQ=255)
                                    ttCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGaa                                                                                                                >  1:225116/1‑149 (MQ=255)
                                      gtcacgaccatgcagtttgatagcgagacctttcaggttcaacaggatttcaattacgtcttcctgaacaccttcGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAg                                                                                                                                                  <  5:160783‑M1/38‑1 (MQ=255)
                                      gtcacgaccatgcagtttgatagcgagacctttcaggttcaacaggatttcaattacgtcttcctgaacaccttcGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAg                                                                                                                                                  >  6:160783‑M1/76‑113 (MQ=255)
                                         ccATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGaa                                                                                                                           <  8:150366/133‑1 (MQ=255)
                                         ccATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGaa                                                                                                                           >  7:150366/1‑133 (MQ=255)
                                         ccATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGa                                                                                                           <  4:361313/149‑1 (MQ=255)
                                         ccATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATGGAAATCCTGTTGAACCTg                                                                                                            >  5:107595/1‑148 (MQ=255)
                                           aTACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGa                                                                                                           >  3:352872/1‑147 (MQ=255)
                                            tACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAg                                                                                                        <  5:223629/149‑1 (MQ=255)
                                               ccTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtc                                                                                                     >  8:212820/1‑149 (MQ=255)
                                               ccTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtc                                                                                                     >  7:282505/1‑149 (MQ=255)
                                                cTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtct                                                                                                    <  8:247047/149‑1 (MQ=255)
                                                cTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtct                                                                                                    <  5:118622/149‑1 (MQ=255)
                                                   ggCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtctc                                                                                                   <  2:123421/147‑1 (MQ=255)
                                                   ggCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtctc                                                                                                   <  1:295182/147‑1 (MQ=255)
                                                   ggCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGtctc                                                                                                   <  2:225116/147‑1 (MQ=255)
                                                   ggCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGc                                                                                                 <  1:301817/149‑1 (MQ=255)
                                                     cAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTa                                                                                               >  6:375576/1‑149 (MQ=255)
                                                      aaCGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGCTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTAt                                                                                              >  2:83021/1‑149 (MQ=255)
                                                       aCGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATc                                                                                             <  5:352639/149‑1 (MQ=255)
                                                            cTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGTGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACt                                                                                        <  7:62139/149‑1 (MQ=255)
                                                               cgccgcATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCa                                                                                     <  8:282505/149‑1 (MQ=255)
                                                                 ccgcATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATg                                                                                   <  4:133491/149‑1 (MQ=255)
                                                                   gcATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGTTCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGt                                                                                 >  1:118280/1‑149 (MQ=255)
                                                                        cTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGa                                                                            <  6:51852/149‑1 (MQ=255)
                                                                         tgttgtCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGAc                                                                           >  3:298702/1‑149 (MQ=255)
                                                                          gttgtCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGAc                                                                           >  2:226693/1‑148 (MQ=255)
                                                                           ttgtCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACg                                                                          >  4:197208/1‑148 (MQ=255)
                                                                            tgtCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACg                                                                          >  6:371093/1‑147 (MQ=255)
                                                                             gtCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGaa                                                                        <  7:328633/148‑1 (MQ=255)
                                                                                ctccATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGAGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTa                                                                    >  7:168397/1‑149 (MQ=255)
                                                                                 tccATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTAc                                                                   >  7:357/1‑149 (MQ=255)
                                                                                  ccATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTCCTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTAc                                                                   >  5:259895/1‑148 (MQ=255)
                                                                                  ccATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTAc                                                                   >  6:326919/1‑148 (MQ=255)
                                                                                  ccATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGATATCAAAAAGCATGGTAGTGACGAAGTTACg                                                                  >  6:261163/1‑149 (MQ=255)
                                                                                   cATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACg                                                                  <  4:298702/148‑1 (MQ=255)
                                                                                       ccTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGAc                                                             <  7:212820/149‑1 (MQ=255)
                                                                                        cTGGCTTTGCAGTAGTCTATGCCTAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGAc                                                             <  6:259895/148‑1 (MQ=255)
                                                                                            cTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGt                                                        <  5:375576/149‑1 (MQ=255)
                                                                                               tgCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCg                                                      >  7:187787/1‑148 (MQ=255)
                                                                                                  agtagtCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGaaaa                                                  <  6:316698/149‑1 (MQ=255)
                                                                                                   gtagtCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGaaa                                                   >  2:67375/1‑147 (MQ=255)
                                                                                                           ggCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCgg                                         <  4:352872/149‑1 (MQ=255)
                                                                                                           ggCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCgg                                         >  7:115355/1‑149 (MQ=255)
                                                                                                            ccttcgatcgcggagtactcatggagtacgccatcgatcGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCggg                                        >  8:338254‑M2/40‑149 (MQ=255)
                                                                                                             cttcgatcgcggagtactcatggagtacgccatcgatcGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGAc                                                                           <  5:160783‑M2/75‑1 (MQ=255)
                                                                                                             cttcgatcgcggagtactcatggagtacgccatcgatcGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGAc                                                                           >  6:160783‑M2/39‑113 (MQ=255)
                                                                                                             cttcgatcgcggagtactcatggagtacgccatcgatcGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCgggg                                       >  5:245067‑M2/39‑149 (MQ=255)
                                                                                                             ccGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCgggg                                       >  3:151472/1‑149 (MQ=255)
                                                                                                             ccGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCgggg                                       >  2:122333/1‑149 (MQ=255)
                                                                                                             ccGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCgggg                                       <  7:251032/149‑1 (MQ=255)
                                                                                                              cGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCggggg                                      <  5:371093/149‑1 (MQ=255)
                                                                                                               tcgatcgcggagtactcatggagtacgccatcgatcGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGggt                                     >  3:221726‑M2/37‑149 (MQ=255)
                                                                                                               gagaTCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGggt                                     >  3:94065/1‑149 (MQ=255)
                                                                                                               gagaTCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGggt                                     >  7:252832/1‑149 (MQ=255)
                                                                                                                agaTCGATGGCGTACTCCATGAGTACTCCTCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTTAACCTGAAAGGTCTCTGTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGggtg                                    <  5:261163/149‑1 (MQ=255)
                                                                                                                   TCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGtt                                 >  7:265104‑M1/1‑149 (MQ=255)
                                                                                                                     GATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTa                                >  1:226693‑M1/1‑148 (MQ=255)
                                                                                                                       tGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCg                             >  2:114726/1‑149 (MQ=255)
                                                                                                                       tGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCg                             >  2:119292/1‑149 (MQ=255)
                                                                                                                         gCGTACTCCATGAGTACTCCGCTATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCt                           <  8:187787/149‑1 (MQ=255)
                                                                                                                             ctcatggagtacgccatcgatcGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGcc                        <  6:245067‑M2/126‑1 (MQ=255)
                                                                                                                              cTCCATGAGTACTCCGCGATCGAAGGTGTTCATGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCg                       <  5:353038/148‑1 (MQ=255)
                                                                                                                               tCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATACTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTAAGCTGACATTGTCGAAAAAGGGTTCGGTGGTGGTTACAGCTGCCGa                      >  5:211828/1‑148 (MQ=255)
                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGTTCGTGACGAAGTTACGCTGCCCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGatat                   >  3:326555/1‑149 (MQ=255)
                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGatat                   >  4:359015/1‑149 (MQ=255)
                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGatat                   >  4:183165/1‑149 (MQ=255)
                                                                                                                                 cATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGatat                   >  1:14328/1‑149 (MQ=255)
                                                                                                                                  aTGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGatat                   >  5:248624/1‑148 (MQ=255)
                                                                                                                                  aTGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATAtt                  <  8:115355/149‑1 (MQ=255)
                                                                                                                                      gTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGACGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAg               <  3:197208/148‑1 (MQ=255)
                                                                                                                                          tCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGt                                                        <  7:252772/103‑1 (MQ=255)
                                                                                                                                          tCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGt                                                        >  8:252772/1‑103 (MQ=255)
                                                                                                                                            cgcgATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGATGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAGCTGGAt         >  5:148096/1‑148 (MQ=255)
                                                                                                                                             gcgATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAGCTGGATCa       <  4:94065/149‑1 (MQ=255)
                                                                                                                                                   gAAGGGGTTCAGGAAGACGTAATTGAAATCCTGTGGAACCTGAAAGGGCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAGCTGGATCACGATg  <  6:107595/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CGCGCCAAAATTACGCTCGAGCCTCTCGAGCGTGGTTTCGGCCATACCCTGGGCAACGCGCTGCGCCGCATCCTGTTGTCCTCCATGCCTGGCTGTGCAGTAGTCGAGGCCGAGATCGATGGCGTACTCCATGAGTACTCCGCGATCGAAGGTGTTCAGGAAGACGTAATTGAAATCCTGTTGAACCTGAAAGGTCTCGCTATCAAACTGCATGGTCGTGACGAAGTTACGCTGACCTTGTCGAAAAAGGGTTCGGGGGTGGTTACCGCTGCCGATATTCAGCTGGATCACGATG  >  NC_002947/562984‑563278

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.