New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1419549 = | 33 (0.550) | 4 (0.090) | 4/208 | NT | 17.1% | intergenic (‑38/+98) | PP_1242/PP_1244 | hypothetical protein/hypothetical protein |
? | NC_002947 | 1419637 = | 13 (0.280) | intergenic (‑126/+10) | PP_1242/PP_1244 | hypothetical protein/hypothetical protein |
TGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGG‑CTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTT > NC_002947/1419491‑1419784 | tgttgtgttgTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGGAGTGCGTGTCGGCGTTGGTGACCCAGTGGGACCCGGCGTGCCCGCGAAGAGGc > 7:185295/1‑149 (MQ=38) tgtgttgtCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGGAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCt > 1:49599/1‑148 (MQ=255) gtgttggCGGGGGGCATTGTTTGGTTGCCCTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCCGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGa < 8:88570/149‑1 (MQ=37) cccTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAgg > 5:103124/1‑137 (MQ=255) cccTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCtg > 5:193745/1‑149 (MQ=255) cccTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGGGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAgg < 6:103124/137‑1 (MQ=255) cTGGATTCTGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGGAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTTATGCAAGGTGTGAGGCTCtgtg > 1:214357/1‑149 (MQ=255) caTTCGGGGTGGCCTGGGCTGGCCGCTTCGCGGCCACGCCCGCCCCCACAGGTACTGTGCAGTGCGGGACGGCGGTGGTCCCCCGGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGt < 2:214357/148‑1 (MQ=37) tGGGTTGCCTGGGCTGGCCTCTTCGCGGGCACCCCCGCACCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCGGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGGCCTTCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATg > 2:11386/1‑149 (MQ=38) CGGGAACGCCCGCTCCCACTGGTACTGTGCAGTGGGGGCCGGGTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAAc > 8:185295‑M1/1‑149 (MQ=255) GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACg > 6:193745‑M1/1‑149 (MQ=255) GGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACg < 1:48150‑M1/149‑1 (MQ=255) ACGCCCGCGCCCACAGTTACGGTGCAGTGCGTGACGGCGGTGGTCACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGa > 3:252977‑M1/1‑149 (MQ=255) gcccgctcccacagggtcaccacagccgtcacgcactgcacagtaccggtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTTATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACt > 7:254750‑M2/75‑149 (MQ=255) GCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACGCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACt < 1:262725‑M1/149‑1 (MQ=255) CCGCTCCCACAGGTACTGTGCTGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGTGGGTCTGTAGGGAAATGCGCGCGCATCTGCACGTGcatctccgccgcgtcg < 2:276606‑M1/149‑6 (MQ=255) ctcccacagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGAcc > 7:235419‑M2/70‑149 (MQ=255) CACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGcc < 7:111999‑M1/149‑1 (MQ=255) cagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTgg < 6:345524‑M2/36‑1 (MQ=255) cagggtcaccacagccgtcacgcactgcacagtacctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTgg > 5:345524‑M2/64‑99 (MQ=255) tgtgCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCg > 7:277911/1‑149 (MQ=255) gTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGc > 4:156569/1‑116 (MQ=255) gTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGc < 3:156569/116‑1 (MQ=255) gTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCAttt > 8:47288/1‑148 (MQ=255) aCGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATg < 2:48150/149‑1 (MQ=255) tgtgGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCa > 6:50405/1‑149 (MQ=255) gtgACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCCAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCACTGTACCGCTTCCATTTCATGGATCACGGc > 4:42267/1‑149 (MQ=255) gtacctgtgggtgcgggcgtgccctggaagtgGCCTGACCTGCTAATGCAAGGTGTTTGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCt < 8:235419‑M2/117‑1 (MQ=255) aCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGc < 8:282457/146‑1 (MQ=255) aCCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGc > 7:282457/1‑146 (MQ=255) cctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCt > 6:220145‑M2/30‑146 (MQ=255) cctgtgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCt < 5:220145‑M2/117‑1 (MQ=255) tgggagcgggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATc < 5:50405‑M2/122‑1 (MQ=255) gggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCa < 1:267346‑M2/123‑1 (MQ=255) gggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCa > 2:267346‑M2/19‑141 (MQ=255) gggcgtgcccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAg > 1:219403‑M2/19‑149 (MQ=255) ccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGc < 1:137311‑M2/119‑1 (MQ=255) ccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGc > 2:137311‑M2/11‑129 (MQ=255) ccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGc > 5:341584‑M2/11‑149 (MQ=255) ccgcgaagagGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGc > 3:361810‑M2/11‑149 (MQ=255) gCCTGACCTGTTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCAGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGttt > 6:357480/1‑148 (MQ=255) gCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGttt > 2:24318/1‑148 (MQ=255) | TGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGG‑CTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAACTGCATCAACGCCGACTCGACCAGCCCCTGTACCGCTTCCATTTCATGGATCACGGCCTGCATCACGATCGAGCTGTGGGCGGTGGGTTT > NC_002947/1419491‑1419784 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |