New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1531769	20 (0.330)	3 (0.060)	3/218	NT	12.2%	coding (107/630 nt)	PP_1344	hypothetical protein
	?	NC_002947	= 1531817	27 (0.550)					coding (59/630 nt)	PP_1344	hypothetical protein

TGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTT  >  NC_002947/1531676‑1531965                                                                                                                                               |                                                                                                                                                     tGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑Acccgcg                                                                                                                                                <  5:81914‑M2/148‑7 (MQ=255)    gCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTTTCGGTATCTTGTAGGAGCGGGTTC‑Acccgcgaa                                                                                                                                              <  8:226434‑M2/147‑9 (MQ=255)                  gTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCTCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑Acccgcgaagaggccggcacagg                                                                                                                                <  4:114509‑M2/147‑23 (MQ=255)                        cATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑Ac                                                                                                                                                     >  4:261047‑M2/1‑119 (MQ=255)                        cATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑Ac                                                                                                                                                     <  3:261047‑M2/120‑2 (MQ=255)                                           tGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCAAATCCCCGGGGCACCCCCGCCAGCCACGGGTAACGGGTTGGTGTAGGAACGGGTAG‑ACCCGCGAAGACGCCGGCACAGGCAGCCAAAAACAACACAgggtgagga                                                                                                      >  2:322009/1‑141 (MQ=255)                                               gTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTCGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATa                                                                                                    <  8:72249/146‑1 (MQ=255)                                               gTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATa                                                                                                    >  7:72249/1‑146 (MQ=255)                                                   gCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTG‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCa                                                                                             >  3:300304/1‑149 (MQ=255)                                                                         ccTGTGCCGGCCTCATAGCGGGGGGACCCGCGCCGGGCAGGGTTTAAGGGTTCTTGGAGGGGCGGGTTC‑ACCCGCGAAGAGGCCCGCCCACGCAGCCAAAGAAAAGACAGGGTCAGCATAGCGTTAAAGTTGGCAAGCCTTGacagaag                                                                       >  2:331344/1‑143 (MQ=12)                                                                         ccTGTCGCGGCCTCTTCCCGGGGCAACCCGCTCCTGCCAGGTTTATCGGTATCTTTTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGTTAGCTTTCATGTTGCCAAGCCTTGAACTCa                                                                        <  7:333282/148‑1 (MQ=38)                                                                                     tctTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTCTTCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGGCAAGCCTTGAACTCAGTGAAAATGccc                                                            >  1:293852/1‑149 (MQ=255)                                                                                     tctTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGcccc                                                           >  4:339576/1‑149 (MQ=255)                                                                                       ttCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTa                                                         >  3:146714/1‑149 (MQ=255)                                                                                         cgcgGGGGAACCCGCTCCTGCCAGTTTTATCGGTATCTTGTCGGAGGGGTTTC‑ACCCGGGAAGTGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTAt                                                        <  1:322009/148‑1 (MQ=255)                                                                                              gggAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTaaaa                                                  >  3:81451/1‑149 (MQ=255)                                                                                                  aCCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑Acccgcgaagaggccggcacaggcaacggagatgttagactgtgcccacgtcacttcacgcgtacccccatggcctacaaacccgcccccgcccagccaccagcc                                              <  2:40011‑M2/149‑105 (MQ=255)                                                                                                    ccGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑ACCAGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGcc                                            >  3:286445/1‑149 (MQ=255)                                                                                                    ccGCTCCCGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑Acccgcgaagaggccggcacaggcaacggagatgttagactgtgcccacgtcacttcac                                                                                            <  3:149865‑M2/101‑59 (MQ=255)                                                                                                    ccGCTCCCGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑Acccgcgaagaggccggcacaggcaacggagatgttagactgtgcccacgtcacttcac                                                                                            >  4:149865‑M2/1‑43 (MQ=255)                                                                                                       cTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCt                                         <  3:339576/149‑1 (MQ=255)                                                                                                                gggTTATGGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACg                                <  4:146714/149‑1 (MQ=255)                                                                                                                     tccGGAATCTTGTAGCCGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGt                            <  7:226434/146‑1 (MQ=255)                                                                                                                       cGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTc                                                                                              >  5:213770/1‑80 (MQ=255)                                                                                                                       cGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTc                                                                                              <  6:213770/80‑1 (MQ=255)                                                                                                                       cGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTAt                          >  3:279755/1‑148 (MQ=255)                                                                                                                         gTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTAt                          >  5:145572/1‑146 (MQ=255)                                                                                                                         gTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAg                       >  2:41890/1‑149 (MQ=255)                                                                                                                         gTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAg                       >  3:17604/1‑149 (MQ=255)                                                                                                                         gTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGACCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAg                       >  1:345996/1‑149 (MQ=255)                                                                                                                           aTCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGc                      <  8:30414/148‑1 (MQ=255)                                                                                                                               tGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTAAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGt                 >  1:306994/1‑149 (MQ=255)                                                                                                                                gTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATc                   <  3:114509/146‑1 (MQ=255)                                                                                                                                 tAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTg                <  4:300304/148‑1 (MQ=255)                                                                                                                                      gCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATc          >  2:170672/1‑149 (MQ=255)                                                                                                                                           ttC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATccacca     >  2:185091/1‑149 (MQ=255)                                                                                                                                               aCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGCCAAGACTGGTTCTCGATAGCGTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCGAAAACAGGCCCCTGCCAAAACGCTGTAGCAGCATCGTGGAAATCCACCACtt  >  2:307620/1‑149 (MQ=255)                                                                                                                                               aCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACtt  >  4:290222/1‑149 (MQ=255)                                                                                                                                               aCCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACtt  >  5:188863/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                     TGGGCGGGGGAGGGTTTGTAGGCCATGGGGGTACGCGTGAAGTGACGTGGGCACAGTCTAACATCTCCGTTGCCTGTGCCGGCCTCTTCGCGGGGGAACCCGCTCCTGCCAGGGTTATCGGTATCTTGTAGGAGCGGGTTC‑ACCCGCGAAGAGGCCGGCACAGGCAGCCAAAGACAAGACTGGTTCTCGATAGCTTTCATGTTGCCAAGCCTTGAACTCAGTGAAAATGCCCCTATCTAAAACAGGCCCCTGCCAAAACGCTGTATCAGCATCGTGGAAATCCACCACTT  >  NC_002947/1531676‑1531965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.