New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3564614 =	24 (0.400)	3 (0.050)	3/254	NT	11.8%	coding (312/1089 nt)	potF‑II	putrescine‑binding protein
	?	NC_002947	3564650 =	22 (0.380)					coding (276/1089 nt)	potF‑II	putrescine‑binding protein

CTTGTCGACGTTGTAGCCGATGCCATTGGTGCCCCACAGGTAAGGCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTCGAACACGTCATAGACCACCTTGATTCCGCTGCT  >  NC_002947/3564506‑3564790                                                                                                                                                 |                                                                                                                                             gactccaacgaaacccttgaaggcaagctgttggccgggcgtacgggttatgacgtggtggtaccgtccaaccacttcctcgcccgccaggcccaggccggcgccttcCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAg                                                                                                                                           >  1:100086‑M1/109‑148 (MQ=255)    tccaacgaaacccttgaaggcaagctgttggccgggcgtacgggttatgacgtggtggtaccgtccaaccacttcctcgcccgccaggcccaggccggcgccttcCTACCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGaa                                                                                                                                            >  6:283945‑M1/106‑144 (MQ=255)    tccaacgaaacccttgaaggcaagctgttggccgggcgtacgggttatgacgtggtggtaccgtccaaccacttcctcgcccgccaggcccaggccggcgccttcCTACCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGaa                                                                                                                                            <  5:283945‑M1/39‑1 (MQ=255)       gACGTTGTAGCCGATGCCATTGGTGCCCCACAGGTAAGGCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCgg                                                                                                                                    >  8:75203/1‑149 (MQ=255)               aGCCGATGCCATTGGTGCCCCACAGGTAAGGCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCggcctgggcc                                                                                                                            >  1:141102/1‑149 (MQ=255)                  cGATGCCATTGGTGGCCCACAGGTAAGGCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTTTGGAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGgcctgggcctgg                                                                                                                         <  6:342041/149‑1 (MQ=255)                          ttGGTGCCCCACAGGTAAGGCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGATGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGGTTGCTGCGGTACAATGTCAGGAAGGCGCCGGCCTGGGCCTGGCTGGCGAg                                                                                                                 <  6:52970/149‑1 (MQ=255)                              tGCCCCACAGGTAAGGCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGGCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGaa                                                                                                              <  5:345207/148‑1 (MQ=255)                              tGCCCAACAGGTAAGGAACGGCGTACTGGTTGCAGGGGTAGTTCTGTTAAAGTAGCTTGAGCAGTTTGGGGTCCAGGTGCAGCCAGTTCGGAAGCTTGCTGAGGTCCAATGGCAGGAAGTCGACGGCCTGAGCCTGGCGGGCGAgc                                                                                                                >  6:345207/1‑145 (MQ=255)                                        gTAAGGCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACg                                                                                                   <  2:141102/149‑1 (MQ=255)                                         atggcatcGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTACTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACgg                                                                                                  <  6:23378/142‑1 (MQ=255)                                             gCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTacc                                                                                              >  7:326584/1‑149 (MQ=255)                                             gCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTacc                                                                                              <  5:161133/149‑1 (MQ=255)                                                      aCTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCa                                                                                     >  5:143244/1‑149 (MQ=255)                                                          gTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTac                                                                                               >  5:100794/1‑135 (MQ=255)                                                          gTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTac                                                                                               <  6:100794/135‑1 (MQ=255)                                                                ggggTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTAc                                                                           <  7:75203/149‑1 (MQ=255)                                                                                        gAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTc                                                     >  4:121353/1‑147 (MQ=255)                                                                                                 ggggTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGATGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGt                                          >  3:333098/1‑149 (MQ=255)                                                                                                    gTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTg                                        >  1:168219/1‑148 (MQ=255)                                                                                                         cttcctgccattggaccgcagcaagcttccgaactggcagGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTc                                   >  1:100086‑M2/41‑148 (MQ=255)                                                                                                          ttcctgccattggaccgcagcaagcttccgaactggtagGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGa                                      >  6:283945‑M2/40‑144 (MQ=255)                                                                                                          ttcctgccattggaccgcagcaagcttccgaactggtagGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGa                                      <  5:283945‑M2/105‑1 (MQ=255)                                                                                                              TGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTCGAacac                             <  2:367043‑M1/149‑1 (MQ=255)                                                                                                                   gTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTCGAACACGTCa                         >  6:141505/1‑148 (MQ=255)                                                                                                                    ttCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCGAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTc                                   <  2:17903/137‑1 (MQ=255)                                                                                                                    ttCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTc                                   >  1:17903/1‑137 (MQ=255)                                                                                                                               gctgcGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTCGAACACGTCATAGACCACCtt              <  1:367043/147‑1 (MQ=255)                                                                                                                                    ggTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTCGAAAACGTCATAGACCACCTTCATTCCg       >  8:141176/1‑149 (MQ=255)                                                                                                                                         aaTGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTCGAACACGTCATAGACCACCTTGATTCCgctgct  >  4:278769/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                             CTTGTCGACGTTGTAGCCGATGCCATTGGTGCCCCACAGGTAAGGCACGGCGTACTGGTTGCCGGGGTCGTTCTGTTCAAGTTGCTTGAGCAGTTTGGGGTCCAGGTGCTGCCAGTTCGGAAGCTTGCTGCGGTCCAATGGCAGGAAGGCGCCGGCCTGGGCCTGGCGGGCGAGGAAGTGGTTGGACGGTACCACCACGTCATAACCCGTACGCCCGGCCAACAGCTTGCCTTCAAGGGTTTCGTTGGAGTCGAACACGTCATAGACCACCTTGATTCCGCTGCT  >  NC_002947/3564506‑3564790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.