New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3766030 =	51 (0.850)	3 (0.050)	3/254	NT	5.5%	coding (361/873 nt)	PP_5599	LysR family transcriptional regulator
	?	NC_002947	3766093 =	55 (0.960)					coding (424/873 nt)	PP_5599	LysR family transcriptional regulator

TCGGTGCGATCTCTACAGCGTTGACAGGCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTC  >  NC_002947/3765947‑3766234                                                                                                                                                   |                                                                                                                                              tCGGTGCGATCTCTACAGCGTTGACAGGCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGa                                                                                                                                             <  3:76316/149‑1 (MQ=255) gtcaaaagcatcaggggttcttctcgaagaacctgtatacgaatgcttttggggacgctgaagggcggacataccatgactccCGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGa                                                                                                                                             >  4:334069‑M1/84‑149 (MQ=255)    aaaagcatcaggggttcttctcgaagaacctgtatacgaatgcttttggggacgctgaagggcggacataccatgactccCGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCggg                                                                                                                                              <  1:255890‑M1/65‑1 (MQ=255)    aaaagcatcaggggttcttctcgaagaacctgtatacgaatgcttttggggacgctgaagggcggacataccatgactccCGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCggg                                                                                                                                              >  2:255890‑M1/81‑145 (MQ=255)      aagcatcaggggttcttctcgaagaacctgtatacgaatgcttttggggacgctgaagggcggacataccatgacacccgcatcgagcgcaccgcaggcaacttgttcgtaaagagggcgcgcggcccctggcgggaggcgggggca                                                                                                                                          >  8:52193‑M2/142‑143 (MQ=255)       cGATCTCTACATCGTTGACAGGCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATg                                                                                                                                       <  4:74705/149‑1 (MQ=255)       cGATCTCTACAGCGTTGACAGGCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATg                                                                                                                                       >  1:200515/1‑149 (MQ=255)       cGATCTCTACAGCGTTGACAGGCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATg                                                                                                                                       <  3:84263/149‑1 (MQ=255)            tctACAGCGTTGACAGGCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATg                                                                                                                                  >  6:338408/1‑149 (MQ=255)              tACAGCGTTGACAGGCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTc                                                                                                                                >  4:143962/1‑149 (MQ=255)                cAGCGTTGACAGGCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCg                                                                                                                              >  2:315923/1‑149 (MQ=255)                            gCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTc                                                                                                                  >  5:49919/1‑149 (MQ=255)                              atatTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTccc                                                                                                                <  2:245067/149‑1 (MQ=255)                                    ccAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCaaaa                                                                                                           <  2:200515/148‑1 (MQ=255)                                    ccAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAg                                                                                                          >  1:364891/1‑149 (MQ=255)                                      agagGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCa                                                                                                        >  2:232248/1‑149 (MQ=255)                                        agGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCAtt                                                                                                      <  4:277939/149‑1 (MQ=255)                                         ggCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTc                                                                                                     <  5:338408/149‑1 (MQ=255)                                          gCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCg                                                                                                    >  7:129561/1‑149 (MQ=255)                                             aTGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACTAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGtat                                                                                                 <  2:333643/149‑1 (MQ=255)                                             aTGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTc                                                                                                                  <  3:341551/132‑1 (MQ=255)                                             aTGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTc                                                                                                                  >  4:341551/1‑132 (MQ=255)                                             aTGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGAGCAGTCTTTAAGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGCTATGTCCGCCCTTCAGCGTCCACAAAAGCATTCGta                                                                                                  >  7:152493/1‑148 (MQ=255)                                                 aTCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTc                                                                                                     >  4:278679/1‑141 (MQ=255)                                                 aTCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTc                                                                                                     <  3:278679/141‑1 (MQ=255)                                                  tCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAgg                                                                                            <  2:208557/149‑1 (MQ=255)                                                           aaGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGttcttc                                                                                      >  5:48124/1‑146 (MQ=255)                                                           aaGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCga                                                                                    <  2:364891/148‑1 (MQ=255)                                                               aTTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGagaaga                                                                               <  2:78868/149‑1 (MQ=255)                                                                    cccGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAAcccc                                                                          >  8:169439/1‑149 (MQ=255)                                                                    cccGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAAcccc                                                                          >  5:343787/1‑149 (MQ=255)                                                                     ccGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCt                                                                         >  7:939/1‑149 (MQ=255)                                                                            tGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCtt                                                                  >  3:176754/1‑149 (MQ=255)                                                                            tGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCtt                                                                  <  8:129561/149‑1 (MQ=255)                                                                              tgccccCGCCTCCCGCCAGGGGCCGCGCGCCCTCTTTACGAACAAGTTGCCTGCGGTGCGCTCGATGCGGGTGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCtt                                                                  >  8:52193‑M1/7‑147 (MQ=255)                                                                              aGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCtttt                                                                <  3:143962/149‑1 (MQ=255)                                                                                gCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGa                                                              >  1:183187/1‑149 (MQ=255)                                                                                 tcccgcatcgagctctccgcaggctacttgttcgtaaagactgcgcgagtcccctggcgtgatgcgGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGAc                                                             >  4:334069‑M2/67‑149 (MQ=255)                                                                                  tACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAAccc                                                                           <  8:53405/134‑1 (MQ=255)                                                                                  tACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAAccc                                                                           >  7:53405/1‑134 (MQ=255)                                                                                  tACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGAc                                                             >  8:138704/1‑148 (MQ=255)                                                                                  cccgcatcgagctctccgcaggctacttgttcgtaaagactgcgcgagtcccctggcgtgatgcgGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCtttt                                                                <  1:255890‑M2/80‑1 (MQ=255)                                                                                  cccgcatcgagctctccgcaggctacttgttcgtaaagactgcgcgagtcccctggcgtgatgcgGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCtttt                                                                >  2:255890‑M2/66‑145 (MQ=255)                                                                                    CGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCaa                                                          >  4:176754‑M1/1‑149 (MQ=255)                                                                                           cGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGAcccc                                                   <  8:939/149‑1 (MQ=255)                                                                                            gCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCg                                                  >  6:252003/1‑149 (MQ=255)                                                                                                ggggACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGa                                              <  7:169439/149‑1 (MQ=255)                                                                                                 gggACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGAc                                             <  1:163815/149‑1 (MQ=255)                                                                                                      tCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGAt                                                                      <  5:71241/119‑1 (MQ=255)                                                                                                      tCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGAt                                                                      >  6:71241/1‑119 (MQ=255)                                                                                                        gcgcAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGt                                                                                                                                     <  4:230039/54‑1 (MQ=255)                                                                                                        gcgcAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGt                                                                                                                                     >  3:230039/1‑54 (MQ=255)                                                                                                         cgcAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGcgcg                                      >  3:219399/1‑148 (MQ=255)                                                                                                          gcAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACATGTTCTTCGAGAACAACCACTGATGCTTTTGACCAAAGACCCCGATCACAAgcgcca                                     >  8:346985/1‑146 (MQ=255)                                                                                                                tttACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGagaaga                                                                               <  4:66549/100‑1 (MQ=255)                                                                                                                   aCGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTc                            >  5:151658/1‑148 (MQ=255)                                                                                                                     gAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGAc                                    >  5:266914/1‑138 (MQ=255)                                                                                                                     gAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGAc                                    <  6:266914/138‑1 (MQ=255)                                                                                                                     gAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTcgac                         >  8:74229/1‑149 (MQ=255)                                                                                                                              gCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGAtt                     >  7:4608/1‑144 (MQ=255)                                                                                                                              gCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGAtt                     <  8:4608/144‑1 (MQ=255)                                                                                                                              gCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTgg                <  6:49919/149‑1 (MQ=255)                                                                                                                                cTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGt               <  7:138704/148‑1 (MQ=255)                                                                                                                                cTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTc              <  1:226271/149‑1 (MQ=255)                                                                                                                                    ggAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGaaa          >  2:180916/1‑149 (MQ=255)                                                                                                                                             gatgcgGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGAtt   <  5:377956‑M2/141‑1 (MQ=255)                                                                                                                                             gatgcgGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTc  >  1:36332‑M2/7‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                              TCGGTGCGATCTCTACAGCGTTGACAGGCATATTGCCAGAGGCCATGAATCAGCTATCAAGCATTGCCCCGCAACTGAGGCTACGCATCACGCCAGGGGACTCGCGCAGTCTTTACGAACAAGTAGCCTGCGGAGAGCTCGATGCGGGAGTCATGGTATGTCCGCCCTTCAGCGTCCCCAAAAGCATTCGTATACAGGTTCTTCGAGAAGAACCCCTGATGCTTTTGACCAAAGACCCCGTTGACAAGCGCGACATCCGCTCGACGATTCTTGGTCGAAACCTGATTC  >  NC_002947/3765947‑3766234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.