New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5703048 =83 (1.380)5 (0.090) 5/258 NT 6.0% coding (883/1683 nt) phaC‑II poly(3‑hydroxyalkanoate) polymerase
?NC_002947 5703087 = 76 (1.300)coding (922/1683 nt) phaC‑II poly(3‑hydroxyalkanoate) polymerase

CCACGCCACCGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGCGACGCTCCTATCAGCGTGGC  >  NC_002947/5702943‑5703233
                                                                                                                                                |                                                                                                                                                  
ccACGCCACCGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCt                                                                                                                                                >  2:271871/1‑149 (MQ=255)
 cACGCCACCGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTg                                                                                                                                               >  2:269430/1‑149 (MQ=255)
  aCGCCACCGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTg                                                                                                                                               >  2:3542/1‑148 (MQ=255)
    gCCACCGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCCACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGc                                                                                                                                              >  8:252578/1‑147 (MQ=255)
    gCCACCGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCaa                                                                                                                                            <  1:325533/149‑1 (MQ=255)
      ggcgaacaggctggccgggctttcgaacttgctgtccagcaagctgaccagatacgtggcactgcgcacccggcgcaattgcttcttggcttgcagatgGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCAt                                                                                                                                                  >  3:188793‑M1/100‑141 (MQ=255)
      ggcgaacaggctggccgggctttcgaacttgctgtccagcaagctgaccagatacgtggcactgcgcacccggcgcaattgcttcttggcttgcagatgGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCAt                                                                                                                                                  <  4:188793‑M1/42‑1 (MQ=255)
      cACCGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGc                                                                                                                                          <  8:279041/149‑1 (MQ=255)
      cACCGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTCCAAGGCCATCTGCAAGc                                                                                                                                          >  3:161649/1‑149 (MQ=255)
         cGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGcc                                                                                                                                         >  3:337075/1‑147 (MQ=255)
              aTGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGc                                                                                                                                  <  2:328554/149‑1 (MQ=255)
               tGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCa                                                                                                                                 <  2:54102/149‑1 (MQ=255)
                  ggCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCACGAAGCAAtt                                                                                                                              >  4:134711/1‑149 (MQ=255)
                     cgggctttcgaacttgctgtccagcaagctgaccagatacgtggcactgcgcacccggcgcaattgcttcttggcttgcagatgGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCt                                                                                                                                                <  4:321366‑M1/44‑1 (MQ=255)
                     cgggctttcgaacttgctgtccagcaagctgaccagatacgtggcactgcgcacccggcgcaattgcttcttggcttgcagatgGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCt                                                                                                                                                >  3:321366‑M1/85‑128 (MQ=255)
                      tttCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTgcgc                                                                                                                          >  6:91879/1‑149 (MQ=255)
                        tCCAGCTATGTGCAAGCTCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGAGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGcc                                                                                                                         <  1:240342/148‑1 (MQ=255)
                           aGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGt                                                                                                                     >  5:205944/1‑149 (MQ=255)
                           aGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGt                                                                                                                     <  1:269430/149‑1 (MQ=255)
                              tATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCgg                                                                                                                       >  8:125302/1‑144 (MQ=255)
                              tATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCgg                                                                                                                       <  7:125302/144‑1 (MQ=255)
                                tgtgCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTTCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCa                                                                                                                <  4:161649/149‑1 (MQ=255)
                                  tgCAAGCCCTGGAGGAATCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAg                                                                                                               <  6:59330/148‑1 (MQ=255)
                                     aaGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGcc                                                                                                           <  4:11346/149‑1 (MQ=255)
                                      aGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCa                                                                                                          <  1:3542/149‑1 (MQ=255)
                                       gCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCAc                                                                                                         >  4:279302/1‑149 (MQ=255)
                                       gCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCAc                                                                                                         <  4:175261/149‑1 (MQ=255)
                                       gCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCAc                                                                                                         <  8:336714/149‑1 (MQ=255)
                                        cccTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACg                                                                                                        >  2:128312/1‑149 (MQ=255)
                                          cTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTa                                                                                                      >  3:276241/1‑149 (MQ=255)
                                          cTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCAACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCaa                                                                                                                                            >  7:132599/1‑111 (MQ=255)
                                          cTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCAACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCaa                                                                                                                                            <  8:132599/111‑1 (MQ=255)
                                             gaggaAGCGCTCAATGCCTGCTGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCt                                                                                                   >  2:144487/1‑149 (MQ=255)
                                             gaggaAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATc                                                                                                    <  5:91879/148‑1 (MQ=255)
                                             gaggaAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCGGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCt                                                                                                   <  3:11638/149‑1 (MQ=255)
                                              aggaAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTg                                                                                                  <  3:73834/149‑1 (MQ=255)
                                              aggaAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTg                                                                                                  <  1:128312/149‑1 (MQ=255)
                                                gaAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGt                                                                                                >  7:51389/1‑149 (MQ=255)
                                                  aGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCCACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTc                                                                                               <  5:365482/148‑1 (MQ=255)
                                                     gcTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCt                                                                                           >  4:181973/1‑149 (MQ=255)
                                                     gcTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCt                                                                                           >  3:41946/1‑149 (MQ=255)
                                                      cTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCtt                                                                                          >  5:302620/1‑149 (MQ=255)
                                                       tCAATGCCTGCCGCAGTATCAGCGGAAAACGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGACTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTg                                                                                         >  1:37034/1‑149 (MQ=255)
                                                         aaTGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCt                                                                                       >  5:42097/1‑149 (MQ=255)
                                                            gcctgccGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGa                                                                                    >  7:246436/1‑149 (MQ=255)
                                                             cctgccGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGa                                                                                    <  7:170061/148‑1 (MQ=255)
                                                               tgccGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAg                                                                                 >  1:331440/1‑149 (MQ=255)
                                                                   gCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAg                                                                             >  4:339763/1‑149 (MQ=255)
                                                                   gCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAg                                                                             >  2:277730/1‑149 (MQ=255)
                                                                       tATCAGCGGCAACCGCGACCCCAACCTGTTGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTc                                                                          >  1:212645/1‑148 (MQ=255)
                                                                         tCAGCGTCAACCGCGACCGCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGTCCAGCAAgctga                                                                         <  3:16307/147‑5 (MQ=255)
                                                                         tCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAACTTGCTGTCCAGCAAgctgac                                                                        <  4:337075/148‑6 (MQ=255)
                                                                           aGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGaaa                                                                      <  2:212645/148‑1 (MQ=255)
                                                                           aGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGaaa                                                                      <  3:279302/148‑1 (MQ=255)
                                                                            gCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGGCAGCTTGCTGGACAGCAAGTTCGAAAGc                                                                    <  2:37034/149‑1 (MQ=255)
                                                                               gCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCACGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCg                                                                 <  3:134711/149‑1 (MQ=255)
                                                                               gCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCg                                                                 <  4:276241/149‑1 (MQ=255)
                                                                               gCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCg                                                                 >  3:236414/1‑149 (MQ=255)
                                                                                 aaCCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGc                                                               <  8:175008/149‑1 (MQ=255)
                                                                                        aCCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTg                                                        <  1:207991/149‑1 (MQ=255)
                                                                                             aaCCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGc                                                   <  6:205944/149‑1 (MQ=255)
                                                                                              aCCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCAc                                                                                                         >  5:297756/1‑94 (MQ=255)
                                                                                              aCCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCAc                                                                                                         <  6:297756/94‑1 (MQ=255)
                                                                                                  gATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGAt                                               >  8:41462/1‑148 (MQ=255)
                                                                                                  gATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGAt                                               >  3:23557/1‑148 (MQ=255)
                                                                                                  gATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGAt                                               >  4:272326/1‑148 (MQ=255)
                                                                                                    tGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAg                                            <  1:72350/149‑1 (MQ=255)
                                                                                                    agatggccttgcagtgcggccatggtcaggccgccggcacaggcCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCg                                                                 <  4:321366‑M2/84‑1 (MQ=255)
                                                                                                    agatggccttgcagtgcggccatggtcaggccgccggcacaggcCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCg                                                                 >  3:321366‑M2/45‑128 (MQ=255)
                                                                                                      atggccttgcagtgcggccatggtcaggccgccggcacaggcCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGcc                                                  <  4:188793‑M2/99‑1 (MQ=255)
                                                                                                      atggccttgcagtgcggccatggtcaggccgccggcacaggcCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGcc                                                  >  3:188793‑M2/43‑141 (MQ=255)
                                                                                                       gTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAg                                            >  7:300960/1‑146 (MQ=255)
                                                                                                        tGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGa                                        <  4:23557/149‑1 (MQ=255)
                                                                                                         GCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCTAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTg                                                                                                  >  6:261834‑M1/1‑90 (MQ=255)
                                                                                                         GCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCTAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTg                                                                                                  <  5:261834‑M1/90‑1 (MQ=255)
                                                                                                          CCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCt                                                                                       >  4:239176‑M1/1‑100 (MQ=255)
                                                                                                          CCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCt                                                                                       <  3:239176‑M1/100‑1 (MQ=255)
                                                                                                          CCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGAc                                       >  7:252578‑M1/1‑148 (MQ=255)
                                                                                                           CTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGc                                                                                <  2:154622‑M1/106‑1 (MQ=255)
                                                                                                           CTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGc                                                                                >  1:154622‑M1/1‑106 (MQ=255)
                                                                                                           CTGTGCCGGCGCCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCa                                     <  2:157832‑M1/149‑1 (MQ=255)
                                                                                                            ttgcagtgcggccatggtcaggccgcactgcaaggcCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCa                                     >  7:343825‑M2/37‑148 (MQ=255)
                                                                                                             gtgCCGGCGGCCTGACCATGGCCGCACTGCAAGGCGATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCCCAGAGCAGACCaac                                   >  2:373112/1‑147 (MQ=255)
                                                                                                              tgCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATc                                   <  8:298936/148‑1 (MQ=255)
                                                                                                              tgCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATc                                   <  2:331440/148‑1 (MQ=255)
                                                                                                                 cggcggCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAg                               <  1:145612/149‑1 (MQ=255)
                                                                                                                    cggcCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCgg                            <  3:272326/149‑1 (MQ=255)
                                                                                                                        cTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCaa                        >  3:62007/1‑149 (MQ=255)
                                                                                                                           aCCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGc                      <  1:144487/148‑1 (MQ=255)
                                                                                                                             cATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGCGAc                   <  3:181973/149‑1 (MQ=255)
                                                                                                                                 gCCGCACTGCCAGGCCATCTGCAAGCCCAGAAGTAATTGCGCCGGGGGAGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCCATGAGCAGACCATCGAATCAGCCAAGCGACGCt                <  2:130073/148‑1 (MQ=255)
                                                                                                                                   cGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACGGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGCGACGCTcc              >  7:99348/1‑148 (MQ=255)
                                                                                                                                      aCTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGCGACGCTCCTAt           >  4:293220/1‑148 (MQ=255)
                                                                                                                                      aCTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGCGACGCTCCTATc          <  6:42097/149‑1 (MQ=255)
                                                                                                                                       cTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGCGACGCTCCTATCa         <  8:246436/149‑1 (MQ=255)
                                                                                                                                          cAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGCGACGCTCCTATCAgcg      >  6:90903/1‑149 (MQ=255)
                                                                                                                                              gcCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGCGACGCTCCTATCAGCGTGGc  <  3:293220‑M2/147‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
CCACGCCACCGTGAATGGGGCCTTTCCAGCTATGTGCAAGCCCTGGAGGAAGCGCTCAATGCCTGCCGCAGTATCAGCGGCAACCGCGACCCCAACCTGATGGGTGCCTGTGCCGGCGGCCTGACCATGGCCGCACTGCAAGGCCATCTGCAAGCCAAGAAGCAATTGCGCCGGGTGCGCAGTGCCACGTATCTGGTCAGCTTGCTGGACAGCAAGTTCGAAAGCCCGGCCAGCCTGTTCGCCGATGAGCAGACCATCGAAGCGGCCAAGCGACGCTCCTATCAGCGTGGC  >  NC_002947/5702943‑5703233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.