New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 573404153 (0.880)7 (0.130) 5/242 NT 12.4% intergenic (‑67/+90) proY/hutH proline (histidine) APC transporter/histidine ammonia‑lyase
?NC_002947 = 5734096 51 (0.930)intergenic (‑122/+35) proY/hutH proline (histidine) APC transporter/histidine ammonia‑lyase

TTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCG  >  NC_002947/5733960‑5734243
                                                                                                                                        |                                                                                                                                                    
ttGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCCCCTACTTCTGTGCGAGCGGGCGCccccgcgaacgg                                                                                                                                          <  7:178686‑M2/149‑13 (MQ=255)
             aTGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCTCCCCCACGGGATGGTGGTTTTCCCCTAATTCAGTGGGAGCGGGCGCGCCCCCGCAGGGCCCCCCCGccccc                                                                                                                             >  8:221889/1‑145 (MQ=255)
              tggcACGGCCTTGAATTGTTTTTGTGGTCGTGAGATGCCGGGGGCTGCGGCGCAGCCCCTTCGCGGGCACGCCCGCGCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCTGGGCGGccc                                                                                                                            <  3:262753/146‑1 (MQ=255)
                  aCGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCCCCCCCCCGCCCACAGGGGCTGGTGTTTTTCACCTACATCTGTGGGAGCGGGCGCGCCCGCGCAGGGCCGCCCCGCCGCCCCCgg                                                                                                                        >  4:274996/1‑149 (MQ=255)
                  aCGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAgg                                                                                                                        <  4:268592/149‑1 (MQ=255)
                   cGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCTGGGCGGcccttcgc                                                                                                                       <  4:80807/149‑6 (MQ=39)
                               gTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGc                                                                                                            <  3:104265/148‑1 (MQ=255)
                                   ttGTGGTCGTGCGATGCCGGGGGCGGCTGCGCAGCCCCTTCGCGGCCACGCCCGCTCCCACAGGGTAGGGTGTTTTCCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        <  8:99828/148‑1 (MQ=255)
                                     gtgGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAg                                                                                                     >  7:214739/1‑149 (MQ=255)
                                     gtgGTCGTCAGATTCCGGGGGCGGCTGCGCAGCCCCTGCGCGGGCACGCCCGCTCCCACCGGGGATGGGGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCa                                                                                                      <  3:319964/148‑1 (MQ=255)
                                       ggTCGTTAGTTTCTGGGGGCTGCTGCGCTGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTa                                                                                                   <  8:178686/149‑1 (MQ=255)
                                       ggTCGGGTGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTa                                                                                                   <  4:344895/149‑1 (MQ=255)
                                        gTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACCCCCGCTCCCACAGGGGATGGGGTTTTGCACCTACTTCTGTGGTAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTac                                                                                                  <  2:212181/149‑1 (MQ=255)
                                            tGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTAc                                                                                                                >  1:34035/1‑131 (MQ=255)
                                            tGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTAc                                                                                                                <  2:34035/131‑1 (MQ=255)
                                               gaTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCCCACCCACAGGGGATGGTGGTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACAcccccc                                                                                           >  2:229716/1‑149 (MQ=255)
                                                                 gcAGCCCCTGCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGa                                                                        <  1:266841/149‑1 (MQ=255)
                                                                       ccTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCGTCTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCCGGGGCGTTAAAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAccc                                                                  >  6:307356/1‑149 (MQ=255)
                                                                        cTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCt                                                                 >  6:92406/1‑149 (MQ=255)
                                                                         ttCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggt                                                                 <  8:93556‑M2/149‑86 (MQ=255)
                                                                           cgcgGGCACCCCCGCTCCCACCGGGGATGGTTTTTTGCCCCTACTTGTGTGGGCGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTgg                                                              <  8:307997/149‑1 (MQ=255)
                                                                               ggCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCaa                                                          <  7:180700/149‑1 (MQ=255)
                                                                                gCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTAGTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGGCAGACTACCCGTGGCCacc                                                         >  4:236737/1‑147 (MQ=255)
                                                                                  aCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAg                                                       <  8:214739/149‑1 (MQ=255)
                                                                                   cGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACAACCGCCGGCAGCAAGCCGGTCCGACTACACTTGGCCAACAgg                                                      >  1:235734/1‑149 (MQ=255)
                                                                                      ccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa                                                                          <  1:102997/126‑1 (MQ=255)
                                                                                      ccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa                                                                          >  2:102997/1‑126 (MQ=255)
                                                                                      ccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTcc                                                   >  8:146746/1‑149 (MQ=255)
                                                                                      ccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTc                                                    >  8:347295/1‑148 (MQ=255)
                                                                                        gCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggct                                                   <  3:193224‑M2/148‑100 (MQ=255)
                                                                                            ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaa                                                                                            <  8:342190‑M2/103‑59 (MQ=255)
                                                                                            ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaa                                                                                            >  7:342190‑M2/1‑45 (MQ=255)
                                                                                            ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGcc                                             >  1:372438/1‑149 (MQ=255)
                                                                                            ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGcc                                             >  6:226026/1‑149 (MQ=255)
                                                                                            ccACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGAGGCCCCAGCGGCGTTTCAGGCTTGGCACTGCACCCGCCGGCAGCAAGCCGGTCACACTACCCTTGGCCAACAGGTCCACGGcc                                             >  5:86567/1‑149 (MQ=255)
                                                                                              acaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtt                                           >  3:181740/1‑149 (MQ=255)
                                                                                                   ggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGa                                      <  3:274996/149‑1 (MQ=255)
                                                                                                    gATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGACAGACTACCCTTgg                                                              <  2:276247/124‑1 (MQ=255)
                                                                                                    gATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGACAGACTACCCTTgg                                                              >  1:276247/1‑124 (MQ=255)
                                                                                                      tGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGatat                                   >  7:133786/1‑149 (MQ=255)
                                                                                                        gtgtTTCGCACCTACTTCGGGGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATcc                                 <  3:6293/149‑1 (MQ=255)
                                                                                                                cACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCga                          <  1:229716/148‑1 (MQ=255)
                                                                                                                     aCTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAac                    >  1:174444/1‑149 (MQ=255)
                                                                                                                     aCTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAac                    >  1:180027/1‑149 (MQ=255)
                                                                                                                      cTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacg                   <  7:221889/149‑1 (MQ=255)
                                                                                                                       ttgtgtgGGAGGGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGGTTCGCAGTAGACCCGCCGGCACCAAGCGGGTCAGACTACCCTTGCCCAACAGGTCCACGGCCTTATCGATATCCGGCGCGAAGAAacc                   <  6:86567/145‑2 (MQ=255)
                                                                                                                       ttCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAACCCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGat                                     <  1:264779/131‑1 (MQ=255)
                                                                                                                       ttCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGat                                     >  2:264779/1‑130 (MQ=255)
                                                                                                                          tgtgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtca               >  5:350869/1‑149 (MQ=255)
                                                                                                                           gtgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt                                         >  4:86527/1‑122 (MQ=255)
                                                                                                                           gtgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCtttt                                         <  3:86527/122‑1 (MQ=255)
                                                                                                                            tggccgcgggcgggcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctcggctcc              >  4:104265‑M2/6‑13 (MQ=255)
                                                                                                                            tgGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCGTTTCGATATCCGGCGCGAAGAAacggtcacg             >  3:287230/1‑149 (MQ=255)
                                                                                                                               tcgCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGaaa                     <  1:315179/136‑1 (MQ=255)
                                                                                                                               tcgCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGaaa                     >  2:315179/3‑138 (MQ=255)
                                                                                                                               gAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCTGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacg                   >  2:158928/1‑140 (MQ=255)
                                                                                                                               gAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCTGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacg                   <  1:158928/140‑1 (MQ=255)
                                                                                                                                  cGGGCGCgcccgcgaagggccgcccagcggccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctcggctcctccatcg        >  3:35587‑M2/1‑7 (MQ=255)
                                                                                                                                   gggCGCgcccgcgaaggggctgcgcagcagccccctgaatctcacgaccacaaaaacaattcaaggacgtgacatgcaacaagctcaaggtctcaagcgcgggctaagtgcccgccacatccgtttcatggccctcggctccgccatcg       >  7:93556‑M2/1‑6 (MQ=255)
                                                                                                                                     gcgcgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCg                                       <  7:346486/114‑1 (MQ=255)
                                                                                                                                     gcgcgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCg                                       >  8:346486/1‑114 (MQ=255)
                                                                                                                                     gcgcgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTg    >  3:75405/1‑149 (MQ=255)
                                                                                                                                      cgcgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGc   <  7:146746/149‑1 (MQ=255)
                                                                                                                                       gcgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCg  >  8:222642/1‑149 (MQ=255)
                                                                                                                                        |                                                                                                                                                    
TTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCG  >  NC_002947/5733960‑5734243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.