New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6020430 =	63 (1.050)	7 (0.120)	4/256	NT	11.3%	coding (219/1305 nt)	dadA‑II	D‑amino acid:quinone oxidoreductase
	?	NC_002947	6020475 =	49 (0.850)					coding (174/1305 nt)	dadA‑II	D‑amino acid:quinone oxidoreductase

GCGCTCCTTGTTCACCGCGTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACAC  >  NC_002947/6020328‑6020623                                                                                                                                                    |                                                                                                                                                       gaagtcacggtggtcgaccgccagccggctgtggccatggaaaccagctttgccaacgccggccagatctcgcccggctatgcctcgccctgggctgcgcctGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAg                                                                                                                                                       >  2:316828‑M1/103‑149 (MQ=255) gaagtcacggtggtcgaccgccagccggcggtggccatggaaaccagctttgccaacgccggccagatctcgcccggctatgcctcgccctgggctgcgcctGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAg                                                                                                                                                       >  1:128418‑M1/103‑149 (MQ=255) gaagtcacggtggtcgaccgccagccggcggtggccatggaaaccagctttgccaacgccggccagatctcgcccggctatgcctcgccctgggctgcgcctGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAg                                                                                                                                                       >  2:136835‑M1/103‑149 (MQ=255)       cTTGTTCACCGCGTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAg                                                                                                                                                 <  8:289299/149‑1 (MQ=255)        ttGTTCACCGCGTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGc                                                                                                                                                >  1:322336/1‑149 (MQ=255)          gTTCACCGCGTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGcc                                                                                                                                               >  1:247768/1‑148 (MQ=255)             cACCGCGTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAgg                                                                                                                                           >  6:118547/1‑149 (MQ=255)               ccGCGTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGc                                                                                                                                         >  4:269275/1‑149 (MQ=255)                cgcgTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGc                                                                                                                                         >  4:79389/1‑148 (MQ=255)                  cgTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAg                                                                                                                                      <  3:318506/149‑1 (MQ=255)                   gTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAgg                                                                                                                                     <  4:352646/149‑1 (MQ=255)                      gCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CAt                                                                                                                                <  3:169419/149‑1 (MQ=255)                                 tgcagtTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGGGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCgag                                                                                                                     <  1:260707/149‑1 (MQ=255)                                 tgcagtTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATa                                                                                                                               >  3:353185/1‑139 (MQ=255)                                 tgcagtTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATa                                                                                                                               <  4:353185/139‑1 (MQ=255)                                   ccatggaaaccagctttgccaacgccggccagatctcgcccggctatgcctcgccctgggctgcgcctGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAgg                                                                                                                                                      >  7:163113‑M1/69‑116 (MQ=255)                                   ccatggaaaccagctttgccaacgccggccagatctcgcccggctatgcctcgccctgggctgcgcctGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAgg                                                                                                                                                      <  8:163113‑M1/48‑1 (MQ=255)                                    catggaaaccagctttgccaacgccggccagatctcgcccggctatgcctcgccctgggctgcgcctGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAgg                                                                                                                                                      <  6:102433‑M1/48‑1 (MQ=255)                                    catggaaaccagctttgccaacgccggccagatctcgcccggctatgcctcgccctgggctgcgcctGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAgg                                                                                                                                                      >  5:102433‑M1/68‑115 (MQ=255)                                        gcgcAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCga                                                                                                                      >  5:381186/1‑141 (MQ=255)                                        gcgcAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCga                                                                                                                      <  6:381186/141‑1 (MQ=255)                                        gcgcAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTgg                                                                                                               <  5:118547/148‑1 (MQ=255)                                         ctgcgcaACTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGc                                                                                                              <  6:2472/144‑1 (MQ=255)                                         cgcAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGc                                                                                                              <  5:77079/148‑1 (MQ=255)                                             gcaTCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCg                                                                                                         <  3:105314/149‑1 (MQ=255)                                              caTCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGt                                                                                                        <  2:321817/149‑1 (MQ=255)                                               aTCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGtt                                                                                                       <  4:341118/149‑1 (MQ=255)                                               aTCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGAGGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGtt                                                                                                       <  7:22217/149‑1 (MQ=255)                                                      ccATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAg                                                                                                <  2:322336/149‑1 (MQ=255)                                                      ccATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAg                                                                                                >  2:172554/1‑149 (MQ=255)                                                            acaGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGtt                                                                                          >  4:258178/1‑149 (MQ=255)                                                              aGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTc                                                                                        >  8:300428/1‑149 (MQ=255)                                                                gTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCa                                                                                      <  2:139677/149‑1 (MQ=255)                                                                gTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCa                                                                                      <  2:247768/149‑1 (MQ=255)                                                                      gTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCa                                                                                >  4:10240/1‑149 (MQ=255)                                                                      gTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCa                                                                                >  1:363818/1‑149 (MQ=255)                                                                       tCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCAc                                                                               >  5:195198/1‑149 (MQ=255)                                                                          aCATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGTCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCAccgc                                                                            <  3:304504/149‑1 (MQ=255)                                                                                 ccGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCTTGGCCACCGCCGGCTgg                                                                     <  3:79389/149‑1 (MQ=255)                                                                                 ccGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTgg                                                                     >  5:193488/1‑149 (MQ=255)                                                                                  cGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCgg                                                                                                                          >  8:289373/1‑95 (MQ=255)                                                                                  cGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCgg                                                                                                                          <  7:289373/95‑1 (MQ=255)                                                                                        cTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGa                                                              >  6:368731/1‑149 (MQ=255)                                                                                           gATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGacca                                                           >  7:167857/1‑149 (MQ=255)                                                                                           gATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGacca                                                           >  6:333894/1‑149 (MQ=255)                                                                                              ggCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCg                                                        >  6:368421/1‑149 (MQ=255)                                                                                                ccAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGt                                                       >  6:5827/1‑148 (MQ=255)                                                                                                   ggggggCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACt                                                   >  3:328523/1‑149 (MQ=255)                                                                                                    cctggcgtaccgctcaaagccatcaagtggctgctggagcgtcacgccAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATgg                                                                                   <  8:163113‑M2/68‑1 (MQ=255)                                                                                                    cctggcgtaccgctcaaagccatcaagtggctgctggagcgtcacgccAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATgg                                                                                   >  7:163113‑M2/49‑116 (MQ=255)                                                                                                    cctggcgtaccgctcaaagccatcaagtggctgctggagcgtcacgccAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATg                                                                                    >  5:102433‑M2/49‑115 (MQ=255)                                                                                                    cctggcgtaccgctcaaagccatcaagtggctgctggagcgtcacgccAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATg                                                                                    <  6:102433‑M2/67‑1 (MQ=255)                                                                                                     ctggcgtaccgctcaaagccatcaagtggctgctggagcgtcacgccAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTc                                                 >  2:136835‑M2/48‑149 (MQ=255)                                                                                                     ctggcgtaccgctcaaagccatcaagtggctgctggagcgtcacgccAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTc                                                 >  1:128418‑M2/48‑149 (MQ=255)                                                                                                     ctggcgtaccgctcaaagccatcaagtggctgctggagcgtcacgccAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACAGCCGGCTGGCGGTCGACCACCGTGACTTc                                                 >  2:316828‑M2/48‑149 (MQ=255)                                                                                                       GGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTc                                                 >  1:147530‑M1/1‑147 (MQ=255)                                                                                                        GCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGTGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGa                                               <  3:12647‑M1/148‑1 (MQ=255)                                                                                                         CGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCg                                                <  1:293893‑M1/148‑1 (MQ=255)                                                                                                             aCGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTg                                                                                                      <  2:360842/88‑1 (MQ=255)                                                                                                                 tCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCg                                     >  1:5673/1‑149 (MQ=255)                                                                                                                    agcagcCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGc                                  <  6:195198/149‑1 (MQ=255)                                                                                                                     gcagcCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGcc                                 <  7:300428/149‑1 (MQ=255)                                                                                                                      cagcCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGc                                  >  6:3690/1‑147 (MQ=255)                                                                                                                          cACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGgta                            <  4:172460/149‑1 (MQ=255)                                                                                                                             ttGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGgtag                           >  7:320635/1‑147 (MQ=255)                                                                                                                               gATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGtagtag                        <  1:172554/148‑1 (MQ=255)                                                                                                                                           cGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTc           >  6:80721/1‑149 (MQ=255)                                                                                                                                            ggTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTcc          <  3:258178/149‑1 (MQ=255)                                                                                                                                              tACGCCAGGTGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGTCAGGTAGTAGGCACTGGCGGTTCCGa        <  4:12647/149‑1 (MQ=255)                                                                                                                                              tACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGa        <  2:293893/149‑1 (MQ=255)                                                                                                                                              tACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGa        <  5:333894/149‑1 (MQ=255)                                                                                                                                                cgccAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGAt       >  6:110295‑M2/5‑148 (MQ=255)                                                                                                                                                    aGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTacac  <  5:80721/149‑1 (MQ=255)                                                                                                                                                    aGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTacac  <  8:167857/149‑1 (MQ=255)                                                                                                                                                    aGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTacac  >  3:130436/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                       GCGCTCCTTGTTCACCGCGTAGCGGCTGGCAGTGCAGTTGCGCAGCATCTGTGCCATCCACAGGTACTGGTCGACATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGG‑‑CATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACAC  >  NC_002947/6020328‑6020623

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.