| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 283827 | 59 (0.980) | 4 (0.070) | 3/250 | NT | 6.1% | coding (1278/2004 nt) | betT‑II | choline/carnitine/betaine transporter |
| ? | NC_002947 | = 283875 | 68 (1.190) | coding (1326/2004 nt) | betT‑II | choline/carnitine/betaine transporter | |||||
CCCTGGACCAGGTGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/283673‑283827‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcaccACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAACACCGTGGTGGCGATCACTGCCTTGCTCCAGGGGTAGGTTTCCAGCAGCAGGTACAGGCTCATCGATGGG < NC_002947/283875‑283731 CCCTGGACCAGGTGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTC < 6:155025/149‑1CCCTGGACCAGGTGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTC < 6:213709/149‑1 CCTGGACCAGGTGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCG > 5:47925/1‑149 CTGGACCAGGTGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGT < 3:17846/149‑1 GGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCA‑‑‑‑CCTCGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAG < 5:149038/148‑1 ATCGATGAGCCCGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACG < 2:196912/149‑1 CCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAG > 5:127101/1‑108 CCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAG < 6:127101/108‑1 CGTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAACACCGTGGTGGCGATCACTGCCTTGCTCCAGGGGTAGGTTTCCAGCAGCAGGTACAGGCTCATCGAT < 8:89608/149‑1 CGTCACCACCCTTGGCCGACAAGGTCGACAGCAACACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAACACCGTGGTGGCGATCACTGCCTTGCTCCAGGGGTAGGTTTCCAGCAGCAGGTACAGGCTCATCGAT < 3:319836/149‑1 GTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAACACCGTGGTGGCGATCACTGCCTTGCTCCAGGGGTAGGTTTCCAGCAGCAGGTACAGGCTCATCGATG < 2:283334/149‑1 GTCACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAACACCGTGGTGGCGATCACTGCCTTGCTCCAGGGGTAGGTTTCCAGCAGCAGGTACAGGCTCATCGATG > 5:253547/1‑149 CACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAACACCGTGGTGGCGATCACTGCCTTGCTCCAGGGGTAGGTTTCCAGCAGCAGGTACAGGCTCATCGATGGG < 3:83785/149‑1 ACCACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAACACCGTGGTGGCGATCACTGCCTTGCTCCAGGGGTAGGTTTCCAGCAGCAGGTACAGGCTCATCGATGGG < 4:74321/148‑1 CCCTGGACCAGGTGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/283673‑283827‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcaccACCCTTGGCCGACAAGGTCGACAGCACCACGGTGCCCGAGTCGGCCGAGGTGACGAAGAACACGAAGCTGATGAACACCGTGGTGGCGATCACTGCCTTGCTCCAGGGGTAGGTTTCCAGCAGCAGGTACAGGCTCATCGATGGG < NC_002947/283875‑283731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |