New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 28382759 (0.980)4 (0.070) 3/250 NT 6.1% coding (1278/2004 nt) betT‑II choline/carnitine/betaine transporter
?NC_002947 = 283875 68 (1.190)coding (1326/2004 nt) betT‑II choline/carnitine/betaine transporter

CAGGTGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGATT  >  NC_002947/283681‑283975
                                                                                                                                                  |                                                                                                                                                     
cAGGTGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCGATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTc                                                                                                                                                     <  5:317811/149‑1 (MQ=255)
    tGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGcc                                                                                                                                                 >  6:149038/1‑149 (MQ=255)
       tAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGa                                                                                                                                               <  7:44680/148‑1 (MQ=255)
       tAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGAc                                                                                                                                              >  6:253547/1‑149 (MQ=255)
        aaaTCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACt                                                                                                                                             >  2:141667/1‑149 (MQ=255)
                   tGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCgtg                                                                                                                                  <  1:141667/149‑1 (MQ=255)
                   tGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCgtg                                                                                                                                  <  3:258036/149‑1 (MQ=255)
                     aCCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCgtggt                                                                                                                                >  6:139277/1‑149 (MQ=255)
                      ccGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCgtggtg                                                                                                                               <  6:100319/149‑1 (MQ=255)
                      ccGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCgtggtg                                                                                                                               <  6:106417/149‑1 (MQ=255)
                       cGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGc                                                                                                                              >  5:218404/1‑149 (MQ=255)
                          aCTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGt                                                                                                                           >  3:329004/1‑149 (MQ=255)
                                            ggACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGGAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCTTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAg                                                                                                          <  6:218404/148‑1 (MQ=255)
                                            ggACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCActcggccgacaaggtcgacagcaccacggtgcccgagtcggccgag                                                                                                          <  5:149038‑M1/148‑47 (MQ=255)
                                              aCAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGggt                                                                                                       >  4:22731/1‑149 (MQ=255)
                                                  cccATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTggtg                                                                                                   <  3:83785‑M2/149‑5 (MQ=255)
                                                  cccATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTggt                                                                                                    <  4:74321‑M2/148‑4 (MQ=255)
                                                    cATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTggtgac                                                                                                 >  5:253547‑M2/1‑143 (MQ=255)
                                                    cATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTggtgac                                                                                                 <  2:283334‑M2/149‑7 (MQ=255)
                                                     aTCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGTTGCTGTCGACCTTGTCGGCCAAGGGTggtgacg                                                                                                <  3:319836‑M2/149‑8 (MQ=255)
                                                     aTCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTggtgacg                                                                                                <  8:89608‑M2/149‑8 (MQ=255)
                                                     aTCGATGAGCCCGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCacccttggccgacaaggtcgacagcaccacggtgcccgagtcggccgaggtgacg                                                                                                <  2:196912‑M1/149‑56 (MQ=255)
                                                      tCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGc                                                                                               >  4:246624/1‑149 (MQ=255)
                                                         aTGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCtga                                                                                            <  5:139277/149‑1 (MQ=255)
                                                         aTGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCtga                                                                                            >  1:289425/1‑149 (MQ=255)
                                                           gAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCtgat                                                                                           >  1:162782/1‑148 (MQ=255)
                                                              ccTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCtgatg                                                                                          >  1:77771/1‑146 (MQ=255)
                                                              ccTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGCTGTTCATCAGCTTCGAGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCtgatg                                                                                          >  7:240862/1‑146 (MQ=255)
                                                                 gTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATg                                                                                    >  2:226736/1‑149 (MQ=255)
                                                                    ccTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGc                                                                                 <  4:104561/149‑1 (MQ=255)
                                                                     ctgctgctgGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACTGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAg                                                                                       <  4:165230/142‑1 (MQ=255)
                                                                     ctgctgctgGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGaagatag                                                                                >  3:165230/1‑143 (MQ=255)
                                                                      tgctgctgGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGATGTCGACATTGGCGGCCAAGGGTGGTGACGGTGATGAAGATGGGcc                                                                                >  4:81938/1‑148 (MQ=255)
                                                                          gctgGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACt                                                                           >  1:352391/1‑149 (MQ=255)
                                                                           ctgGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAAc                                                                            <  3:22731/147‑1 (MQ=255)
                                                                             ggAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGc                                                                        >  8:126354/1‑149 (MQ=255)
                                                                              gAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATgg                                                                                   <  8:338345/137‑1 (MQ=255)
                                                                              gAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATgg                                                                                   >  7:338345/1‑137 (MQ=255)
                                                                                aaCCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGc                                                                     <  2:289425/149‑1 (MQ=255)
                                                                                   cTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTa                                                                  >  7:67702/1‑149 (MQ=255)
                                                                                       cccTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCtt                                                              >  1:157168/1‑149 (MQ=255)
                                                                                        ccTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCacccttggccgacaaggtcgacagcaccacggtgcccgagtcggccgag                                                                                                      <  6:127101‑M1/108‑50 (MQ=255)
                                                                                        ccTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCacccttggccgacaaggtcgacagcaccacggtgcccgagtcggccgag                                                                                                      >  5:127101‑M1/1‑59 (MQ=255)
                                                                                         cTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCt                                                                                              <  8:56200/115‑1 (MQ=255)
                                                                                         cTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCtttt                                                            >  1:140929/1‑149 (MQ=255)
                                                                                          tGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTg                                                          >  2:319026/1‑149 (MQ=255)
                                                                                           ggAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTgg                                                         >  8:71692/1‑149 (MQ=255)
                                                                                            gAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTgg                                                         <  6:47925/148‑1 (MQ=255)
                                                                                            gAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTg                                                          <  1:226736/147‑1 (MQ=255)
                                                                                            gAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTg                                                          <  3:74321/147‑1 (MQ=255)
                                                                                              gCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTggggg                                                      >  4:245611/1‑149 (MQ=255)
                                                                                              gCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTggggg                                                      >  2:239057/1‑149 (MQ=255)
                                                                                                aaGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGc                                                    <  4:83785/149‑1 (MQ=255)
                                                                                                       tGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACt                                             <  2:352391/149‑1 (MQ=255)
                                                                                                        gATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTg                                            >  5:219437/1‑149 (MQ=255)
                                                                                                         aTCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCt                                                                       >  1:10212/1‑122 (MQ=255)
                                                                                                         aTCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCt                                                                       <  2:10212/122‑1 (MQ=255)
                                                                                                          tCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCa                                          <  7:89608/149‑1 (MQ=255)
                                                                                                              caccacGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGa                                      >  5:166489/1‑149 (MQ=255)
                                                                                                                           atcaGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCt                         >  5:224533/1‑149 (MQ=255)
                                                                                                                           atcaGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCt                         >  6:94154/1‑149 (MQ=255)
                                                                                                                                cTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCtgatga                                                                                         >  1:36208/1‑81 (MQ=255)
                                                                                                                                cTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCtgatga                                                                                         <  2:36208/81‑1 (MQ=255)
                                                                                                                                    gtgtTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGc                <  3:158453/149‑1 (MQ=255)
                                                                                                                                     tgtTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCt               >  6:234298/1‑149 (MQ=255)
                                                                                                                                       ttcttcGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTgg             <  3:245611/149‑1 (MQ=255)
                                                                                                                                       tgcttcGTCACCTCGGCCGACTGCGGCACCGTGCTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGTTGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTgg             <  8:240862/147‑1 (MQ=255)
                                                                                                                                            cGTCAGCTCGGCGGACTCGGGCACCGTGGTGCTGTGGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGgca           <  2:157168/146‑1 (MQ=255)
                                                                                                                                            cGTCACCacccttggccgacaaggtcgacagcaccacggtgcccgagtcggccgaggtgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccaggggtaggtttccagcagcaggtacaggctcatcgat         <  8:89608‑M1/149‑143 (MQ=255)
                                                                                                                                            cGTCACCacccttggccgacaaggtcgacagcaacacggtgcccgagtcggccgaggtgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccaggggtaggtttccagcagcaggtacaggctcatcgat         <  3:319836‑M1/149‑143 (MQ=255)
                                                                                                                                            cGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTggtgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccaggggtaggtttccagcagcaggtacgggctcatcgat         <  2:196912‑M2/149‑95 (MQ=255)
                                                                                                                                             gTCACCacccttggccgacaaggtcgacagcaccacggtgcccgagtcggccgaggtgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccaggggtaggtttccagcagcaggtacaggctcatcgatg        <  2:283334‑M1/149‑144 (MQ=255)
                                                                                                                                             gTCACCacccttggccgacaaggtcgacagcaccacggtgcccgagtcggccgaggtgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccaggggtaggtttccagcagcaggtacaggctcatcgatg        >  5:253547‑M1/1‑6 (MQ=255)
                                                                                                                                             gTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTCGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGgcagc         <  1:283334/148‑1 (MQ=255)
                                                                                                                                             gTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCAt       >  1:248321/1‑149 (MQ=255)
                                                                                                                                              tCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCAc                                  <  5:256887/121‑1 (MQ=255)
                                                                                                                                              tCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCAc                                  >  6:256887/1‑121 (MQ=255)
                                                                                                                                               caccacccttggccgacaaggtcgacagcaccacggtgcccgagtcggccgaggtgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccaggggtaggtttccagcagcaggtacaggctcatcgatggg      <  3:83785‑M1/149‑146 (MQ=255)
                                                                                                                                               cACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATc      >  3:185330/1‑148 (MQ=255)
                                                                                                                                                accacccttggccgacaaggtcgacagcaccacggtgcccgagtcggccgaggtgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccaggggtaggtttccagcagcaggtacaggctcatcgatggg      <  4:74321‑M1/148‑146 (MQ=255)
                                                                                                                                                  cTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCGAGGgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccaggggtaggtttccagcagcaggtacaggctcatcgatgggttgtcc    <  5:149038‑M2/148‑101 (MQ=255)
                                                                                                                                                  cTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTggtgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccagg                                            <  6:127101‑M2/108‑60 (MQ=255)
                                                                                                                                                  cTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTggtgacgaagaacacgaagctgatgaacaccgtggtggcgatcactgccttgctccagg                                            >  5:127101‑M2/1‑49 (MQ=255)
                                                                                                                                                  cTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGAtt  >  5:176415/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                     
CAGGTGATAAATCACGGCATGACCGCACTGGGTCAGTCGGCGTTGGACAACCCATCGATGAGCCTGTACCTGCTGCTGGAAACCTACCCCTGGAGCAAGGCAGTGATCGCCACCACGGTGTTCATCAGCTTCGTGTTCTTCGTCACCTCGGCCGACTCGGGCACCGTGGTGCTGTCGACCTTGTCGGCCAAGGGTGGTGACGCTGATGAAGATGGGCCGAACTGGCTGCGTATCTTTTGGGGGGCGATGACTGCACTGATCACCAGTGCGCTGTTGTTCGCTGGCAGCATCGATT  >  NC_002947/283681‑283975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.