New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 35670840 (0.660)3 (0.050) 3/246 NT 5.9% coding (53/1377 nt) tdcG‑I L‑serine dehydratase
?NC_002947 = 356769 59 (1.050)coding (114/1377 nt) tdcG‑I L‑serine dehydratase

CGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/356555‑356708
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccagctcACCGCGTTCGCGCAGGCCCTGAACGAACAGGGCGCCAGCACGCATGGGGCCGACGGTGTGGGAGCTGGAGG  <  NC_002947/356769‑356699
                                                                                                                                                                                                                                 
CGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTC                                                                               >  3:215111/1‑148
                                                 CCCGCCCTGCGCATGGTGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCACCGCGTTCGCGCAGGCCCTGAACGAACAGGGCGCCAGCACGCA                             >  2:6838/1‑149
                                                                          ACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCACCGCGTTCGCGCAGGCCCTGAACGAACAGGGCGCCAGCACGCATGGGGCCGACGGTGTGGGAGCTGGA    <  1:6838/149‑1
                                                                            AAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGGCGGGCCCTCCAGCTCACCGCGTTCGCGCAGGCCCTGAACGAACAGGGCGCCAGCACGCATGGGGCCGACGGTGTGGGAGCTGGAGG  <  2:316850/149‑1
                                                                                                                                                                                                                                 
CGATGATGCTGGCATTCAAGGCGGCCCGCTGTTTGAGCCTAGCAGCTACCCCGCCCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/356555‑356708
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctccagctcACCGCGTTCGCGCAGGCCCTGAACGAACAGGGCGCCAGCACGCATGGGGCCGACGGTGTGGGAGCTGGAGG  <  NC_002947/356769‑356699

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.