New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 670392	48 (0.800)	3 (0.050)	3/252	NT	6.0%	coding (1834/2355 nt)	pbpC	peptidoglycan glycosyltransferase
	?	NC_002947	= 670445	49 (0.850)					coding (1887/2355 nt)	pbpC	peptidoglycan glycosyltransferase

GCTGATGTTGCAGGTGCACGATCTGTTGAGCAATCGCGACAGCCAACGCGGCATCAGCGTCCCGGTAGCGCCGGTACCTGCGAATATCGGCGTTGCAGCGATCTGTTGGCCGCTGGGTCAGCCGATGAGCAAGCAGGACACCAACTGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/670241‑670392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcTGCCTGCAAGGTTGGCGGCGTGGTGCCGTCCAGGGTCCATGCAAAGCGCTGACGCCGACAGTTGGTGTCCTGCTTGCTCATCGGCTGACCCAGCGGCCAACAGATCGCTGCAACGCCGATATTCGCAGGTACCGGCGCTACCGGGA  <  NC_002947/670445‑670300                                                                                                                                                                                                                                                                                                            GCTGATGTTGCAGGTGCACGATCTGTTGAGCAATCGCGACAGCCAACGCGGCATCAGCGTCCCGGTAGCGCCTGTACCTGCGAATATCGGCGTTGCAGCGATCTGTTGGCCGCTGGGTCAGCCGATGAGCAAGCAGGACACCAACTGTC                                                                                                                                                       <  7:243818/149‑1    GATGTTGCAGGTGCACGATCTGTTGAGCAATCGCGACAGCCAACGCGGCATCAGCGTCCCGGTAGCGCCGGTACCTGCGAATATCGGCGTTGCAGCGATCTGTTGGCCGCTGGGTCAGCCGATGAGCAAGCAGGACACCAACTGTCGGC                                                                                                                                                    >  2:257015/1‑149                    GATCTGTTGAGCAATCGCGACAGCCAACGCGGCATCAGCGTCCCGGTAGCGCCGGTACCTGCGAATATCGGCGTTGCAGCGATCTGTTGGCCGCTGGGTCAGCCGATGAGCAAGCAGGACACCAACTGTCG                                                                                                                                                      <  5:357125/131‑1                    GATCTGTTGAGCAATCGCGACAGCCAACGCGGCATCAGCGTCCCGGTAGCGCCGGTACCTGCGAATATCGGCGTTGCAGCGATCTGTTGGCCGCTGGGTCAGCCGATGAGCAAGCAGGACACCAACTGTCG                                                                                                                                                      >  6:357125/1‑131                                    GCGACAGCCAACGCGGCATCAGCGTCCCGGTAGCGCCGGTACCTGCGAATATCGGCGTTGCAGCGATCTGTTGGCCGCTGGGTCAGCCGATGAGCAAGCAGGACACCAACTGTCGGCTGCCTGCAAGGTTGGCGGCGTGGTGCCGTC                                                                                                                      >  6:369921/1‑147                                                              CCGGTAGCGCCGGTACCTGCGAATATCGGCGTTGCAGCGATCTGTTGGCCGCTGGGTCAGCCGATGAGCAAGCAGGACACCAACTGTCGGCTGCCTGCAAGGTTGGCGGCGTGGTGCCGTCCAGGGTCCATGCAAAGCGCTGACGCCGA                                                                                          <  5:369921/149‑1                                                                  TAGCGCCGGTACCTGCGAATATCGGCGTTGCAGCGATCTGTTGGCCGCTGGGTCAGCCGATGAGCAAGCAGGACACCAACTGTCGGCTGCCTGCAAGGTTGGCGGCGTGGTGCCGTCCAGGGTCCATGCAAAGCGCTGACGCCGACAGT                                                                                      <  5:290194/149‑1                                                                                                                                                      GGCTGCCTGCAAGGTTGGCGGCGTGGTGCCGTCCAGGGTCCATGCAAAGCGCTGACGCCGACAGTTGGTGTCCTGCTTGCTCATCGGCTGACCCAGCGGCCTACAGATCGCTGCAACGCCGATATTCGCAGGTACCGGCGCTACCGGGA  <  6:252726/149‑1                                                                                                                                                      GGCTGCCTGCAAGGTTGGCGGCGTGGTGCCGTCCAGGGTCCATGCAAAGCGCTGACGCCGACAGTTGGTGTCCTGCTTGCTCATCGGCTGACCCAGCGGCCAACAGATCGCTGCAACGCCGATATTCGCAGGTACCGGCGCTACCGGGA  <  2:347813/149‑1                                                                                                                                                                                                                                                                                                            GCTGATGTTGCAGGTGCACGATCTGTTGAGCAATCGCGACAGCCAACGCGGCATCAGCGTCCCGGTAGCGCCGGTACCTGCGAATATCGGCGTTGCAGCGATCTGTTGGCCGCTGGGTCAGCCGATGAGCAAGCAGGACACCAACTGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/670241‑670392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcggcTGCCTGCAAGGTTGGCGGCGTGGTGCCGTCCAGGGTCCATGCAAAGCGCTGACGCCGACAGTTGGTGTCCTGCTTGCTCATCGGCTGACCCAGCGGCCAACAGATCGCTGCAACGCCGATATTCGCAGGTACCGGCGCTACCGGGA  <  NC_002947/670445‑670300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.