New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 756369 | 50 (0.830) | 3 (0.050) | 3/248 | NT | 6.1% | coding (965/1401 nt) | PP_0646 | hypothetical protein |
? | NC_002947 | = 756384 | 45 (0.800) | coding (980/1401 nt) | PP_0646 | hypothetical protein |
TCTGCGCCATGGCCATCTGAATAGTCCATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/756214‑756369 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaccaaTGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGATGGA < NC_002947/756384‑756238 TCTGCGCCATGGCCATCTGAATAGTCCATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCT > 5:6837/1‑149 GCGCCATGGCCATCTGAATAGTCCATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGA > 2:89636/1‑149 CGCCATGGCCATCTGAATAGTCCATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGA < 7:284629/148‑1 CGCCATGGCCATCTGAATAGTCCATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTC < 8:9947/146‑1 GAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAATGATGCACAAGGCTCTTGGTCGAGATATTCAAG < 1:89636/149‑1 TCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAATGATGCACAAGGCTCTTGGTCGAG > 3:34494/1‑108 TCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAATGATGCACAAGGCTCTTGGTCGAG < 4:34494/108‑1 GACCAATGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCGTAGAGTCACATGTTTATTTAGAAAAGTCGCCTTCAGCTGATCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACG < 7:244844/148‑1 GACCAATGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGA > 6:6837/1‑149 ACCAATGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGAT > 4:130786/1‑149 ACCAATGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGAT < 6:365127/149‑1 ACCAATGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGA < 3:173383/148‑1 ACCAATGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGA > 4:173383/1‑148 CCAATGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGATG > 5:112123/1‑149 CCAATGATGCACAAGGCTCTTGGTAGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGATG > 8:267150/1‑149 AATGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGATGGA < 6:112123/149‑1 TCTGCGCCATGGCCATCTGAATAGTCCATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/756214‑756369 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgaccaaTGATGCACAAGGCTCTTGGTCGAGATATTCAAGCTTTTCTTCAGCCGCTCGTAGGCCCCTAGATTCAGATGTTTATTTAGAAAAGTCGCCTTCAGCTGACCATCTAGCTGCTCCAATAACAGCCGTCGTTCGGCGAAGAACGATGGA < NC_002947/756384‑756238 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |