New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 756369 | 50 (0.830) | 3 (0.050) | 3/248 | NT | 6.1% | coding (965/1401 nt) | PP_0646 | hypothetical protein |
? | NC_002947 | = 756384 | 45 (0.800) | coding (980/1401 nt) | PP_0646 | hypothetical protein |
TCCATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAGGTGGTACATCTTCCTATCTGAAAGTCCAAGAGG > NC_002947/756238‑756530 | tCCATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCAtt < 6:112123‑M2/149‑3 (MQ=255) cATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCTACCAAGAGCCTTGTGCATCAttgg > 8:267150‑M2/1‑145 (MQ=255) cATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCAttgg > 5:112123‑M2/1‑145 (MQ=255) aTCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCAttggt > 4:130786‑M2/1‑144 (MQ=255) aTCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCAttggt < 6:365127‑M2/149‑6 (MQ=255) tCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCAttggtc > 6:6837‑M2/1‑143 (MQ=255) tCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCAttggt > 4:173383‑M2/1‑143 (MQ=255) tCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCAttggt < 3:173383‑M2/148‑6 (MQ=255) cGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGATCAGCTGAAGGCGACTTTTCTAAATAAACATGTGACTCTACGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCAttggtc < 7:244844‑M2/148‑7 (MQ=255) cGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCcggcg < 4:181917/149‑1 (MQ=255) acgacgGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGc < 7:75274/149‑1 (MQ=255) acgGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAg < 7:168958/149‑1 (MQ=255) ttATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGAt > 6:225083/1‑149 (MQ=255) gAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTg < 5:365127/148‑1 (MQ=255) agcagcTAGATGTGAAGCTTAAGGCCACTTTTCTAATTAAACATCTGAATCTAGGGGCCTTCGAGCGGCTGAAGAAAAGCTGGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTgg < 8:244844/148‑1 (MQ=255) gctGGTCAGCTGAAGTCGACTTTTCAAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGcc < 4:269405/145‑1 (MQ=255) gATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTTAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGc < 2:98172/146‑1 (MQ=255) gATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCca < 1:286212/148‑1 (MQ=255) tCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACt < 6:125497/149‑1 (MQ=255) aGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTg > 8:221515/1‑149 (MQ=255) aGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTg > 7:67791/1‑149 (MQ=255) gCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGt > 6:116917/1‑149 (MQ=255) gACTTTTCTAAATAAACATCTGAATCTAGGGGCCAACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTAGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTgg > 2:38171/1‑149 (MQ=255) ttCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACAAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAg > 5:272744/1‑149 (MQ=255) cTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGc < 5:116917/148‑1 (MQ=255) aaataaaCATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTCGACAAAGTGGCGAAGCt > 4:45617/1‑147 (MQ=255) aattaaCATCTTTATCTAGGGGCCTACTATCGGCTGAAGAAAAGCTTTTATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCTGATTCCTGGGTTCGCCACATACTTGGACAAAGTGGCGAAGCTTa < 6:272744/148‑1 (MQ=255) aataaaCATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGaaa > 2:157574/1‑87 (MQ=255) aataaaCATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGaaa < 1:157574/87‑1 (MQ=255) aataaaCATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTag > 8:337013/1‑149 (MQ=255) aataaaCATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTa < 3:230530/148‑1 (MQ=255) aCATCTTAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGTGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAATTGGCGAAGCTTagtaagt < 2:338446/149‑1 (MQ=255) cATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTagtaagta > 5:139764/1‑149 (MQ=255) aTCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTgg > 8:116515/1‑132 (MQ=255) aTCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTgg < 7:116515/132‑1 (MQ=255) tCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCTTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTAcc > 3:177293/1‑149 (MQ=255) cTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGt > 4:290936/1‑106 (MQ=255) cTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGt < 3:290936/106‑1 (MQ=255) gAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGACAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACATTc > 5:25689/1‑149 (MQ=255) aTCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTTGTAAGTACCTTCgg > 8:323535/1‑149 (MQ=255) aTCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCgg < 7:337013/149‑1 (MQ=255) gCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTAtggtgg < 8:67791/149‑1 (MQ=255) gCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCg > 2:378411/1‑149 (MQ=255) cTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGCAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTACTAAGTACCTTCGGTATGGTGGGCATGTCGGAAt > 6:329753/1‑149 (MQ=255) tGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTAGGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAAtt < 1:38171/149‑1 (MQ=255) gaagaaAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTagt > 6:104123/1‑115 (MQ=255) aagaaTAGCTTGATTATCTCGACCAAGAGGCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGATTTg < 6:139764/148‑1 (MQ=255) gaaAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCt > 2:94501/1‑149 (MQ=255) cTTGAATATCTCGACCAAGAGCCTTGTGCATCAttggtcgagatattcaagcttttcttcagccgctcgtaggcccctagattcagatgtttatttagaaaagtcgccttcagctgaccatctagctgctccaataacagccgtcgttc < 1:89636‑M2/149‑117 (MQ=255) ttGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAggtgg > 4:221336/1‑149 (MQ=255) gAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAggtggt < 1:378411/148‑1 (MQ=255) aaTATCTCGACCAAGAGCTTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAGGTGGTa < 4:177293/148‑1 (MQ=255) ctcGACCAAGAGCCTTGTGCATCAttggtcgagatattcaagcttttcttcagccgctcgtaggcccctagattcagatgtttatttagaaaagtcgccttcagctga > 3:34494‑M2/1‑24 (MQ=255) ctcGACCAAGAGCCTTGTGCATCAttggtcgagatattcaagcttttcttcagccgctcgtaggcccctagattcagatgtttatttagaaaagtcgccttcagctga < 4:34494‑M2/108‑85 (MQ=255) ctcGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGt > 7:168093/1‑123 (MQ=255) ctcGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGt < 8:168093/123‑1 (MQ=255) tcGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAGGTGGTACATCTTc > 3:361539/1‑149 (MQ=255) cGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGAGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAGGTGGTACATCTTcc > 1:294217/1‑149 (MQ=255) cAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAGGTGGTACATCTTCCTATc < 5:225083/149‑1 (MQ=255) catcatTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAGGTGGTACATCTTCCTATCTGAAAGTCCaa > 8:26448/1‑147 (MQ=255) atcatTGGTCGAAAGCCCGCGGGCCAGGGCAGATTCCTGGGTACGCCACCTACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAGGTGGTACATCTTCCTATCTGAAAGTCCAagag < 6:375876/149‑1 (MQ=255) tcatTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAGGTGGTACATCTTCCTATCTGAAAGTCCAAGAgg > 5:50347/1‑149 (MQ=255) | TCCATCGTTCTTCGCCGAACGACGGCTGTTATTGGAGCAGCTAGATGGTCAGCTGAAGGCGACTTTTCTAAATAAACATCTGAATCTAGGGGCCTACGAGCGGCTGAAGAAAAGCTTGAATATCTCGACCAAGAGCCTTGTGCATCATTGGTCGAAAGCCGGCGGGCCAGGGCAGATTCCTGGGTACGCCACATACTTGGACAAAGTGGCGAAGCTTAGTAAGTACCTTCGGTATGGTGGGCATGTCGGAATTGGCTTAGGTGGTACATCTTCCTATCTGAAAGTCCAAGAGG > NC_002947/756238‑756530 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |