| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1058458 | 46 (0.760) | 4 (0.070) | 4/250 | NT | 7.6% | coding (430/597 nt) | sodB | superoxide dismutase |
| ? | NC_002947 | = 1058535 | 54 (0.950) | coding (353/597 nt) | sodB | superoxide dismutase | |||||
GCCTTCGAACTGCTCGGCAACGAAGGCCCAGTTGACCAGGTTCCAGAACGCCTCGACGTACTTCGGACGCAGGTTGCGGTAGTCGATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1058309‑1058458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggcaCCTTCGGTTCCGGCTGGGGCTGGCTGGTGAAGAAAGCTGACGGTTCCCTGGCCCTGGCCAGCACCATCGGCGCCGGCTGCCCACTGACCAGCGGCGACACCCCGCTGCTGACCTGCGACGTCTGGGAACACGCCTACTACATC < NC_002947/1058535‑1058393 GCCTTCGAACTGCTCGGCAACGAAGGCCCAGTTGACCAGGTTCCAGAACGCCTCGACGTACTTCGGATGCAGGTTGCGGTAGTCGATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGTG < 3:367099/146‑1GCCTTCGAACTGCTCGGCAACGAAGGCCCAGTTGACCAGGTTCCAGAACGCCTCGACGTACTTCGGACGCAGGTTGCGGTAGTCGATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGTG < 2:259086/146‑1 CCTTCGAACTGCTCGGCAACGAAGGCCCAGTTGACCAGGTTCCAGAACGCCTCGACGTACTTCGGACGCAGGTTGCGGTAGTCGATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGTGGGC < 1:5501/148‑1 GAAGGCCCAGTTGACCAGGTTCCAGAACGCCTCGACGTACTTCGGACGCAGGTTGCGGTAGTCGATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGTGGGCACCTTCGGTTCCGGCTGGGGC > 2:216248/1‑149 CAGGTTCCAGAACGCCTCGACGTACTTCGGACGCAGGTTGCGGTAGTCGATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGTGGGCACCTTCGGTTCCGGCTGGGGCTGGCTGGTGAAGA > 6:93974/1‑147 CTCGACGTACTTCGGACGCAGGTTGCGGTAGTCGATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGT > 3:353258/1‑94 CTCGACGTACTTCGGACGCAGGTTGCGGTAGTCGATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGT < 4:353258/94‑1 ATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGTGGGCACCTTCGGTTCCGGCTGGGGCTGGCTGGTGAAGAAAGCTGACGGTTCCCTGGCCCTCGCCAGCACCATCGGCGCCGGCTGCCCAC < 1:216248/149‑1 TGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGTGGGCACCTTCGGTTCCGGCTGGGGCTGGCTGGTGAAGAAAGCTGACGGTTCCCTGGCCCTGGCCAGCACCATCGGCGCCGGCTGCCCACT < 5:93974/149‑1 TGGGCACCTTCGGTTCCGGCTGGGGCTGGCTGGTGAAGAAAGCTGACGGTTCCCTGGCCCTGGCCAGCACCATCGGCGCCGGCTGCCCACTGACCAGCGGCGACACCCCGCTGCTGACCTGCGACGTCTGGGAACACGCCTACTACATC < 8:299458/149‑1 GGGCACCTTCGGTTCCGGCTGGGGCTGGCTGGTGAAGAAAGCTGACGGTTCCCTGGCCCTGGCCAGCACCATCGGCGCCGGCTGCCCACTGACCAGCGGCGACACCCCGCTGCTGACCTGCGACGTCTGGGAACAC < 3:218368/136‑1 GGGCACCTTCGGTTCCGGCTGGGGCTGGCTGGTGAAGAAAGCTGACGGTTCCCTGGCCCTGGCCAGCACCATCGGCGCCGGCTGCCCACTGACCAGCGGCGACACCCCGCTGCTGACCTGCGACGTCTGGGAACAC > 4:218368/1‑136 GCCTTCGAACTGCTCGGCAACGAAGGCCCAGTTGACCAGGTTCCAGAACGCCTCGACGTACTTCGGACGCAGGTTGCGGTAGTCGATGTAGTAGGCGTGTTCCCAGACGTCGCAGGTCAGCAGCGGGGTGTCGCCGCTGGTCAGTGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1058309‑1058458‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggcaCCTTCGGTTCCGGCTGGGGCTGGCTGGTGAAGAAAGCTGACGGTTCCCTGGCCCTGGCCAGCACCATCGGCGCCGGCTGCCCACTGACCAGCGGCGACACCCCGCTGCTGACCTGCGACGTCTGGGAACACGCCTACTACATC < NC_002947/1058535‑1058393 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |