New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1586634 = | 61 (1.010) | 6 (0.100) | 5/254 | NT | 9.2% | coding (772/909 nt) | PP_1391 | LysR family transcriptional regulator |
? | NC_002947 | 1586683 = | 60 (1.040) | coding (723/909 nt) | PP_1391 | LysR family transcriptional regulator |
GCAGGTCGCCGTGCCCGTATCCGGAAACATCAGTGCCAACGAGGTGATGACCCTGCAAAGGGCTGCGCTGGCTGGCGCAGGTATCACCATGCTGCCAACCTACCAGGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1586785‑1586634 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgGTAGGTTGGCAGCATGGTGATACCTGCGCCAGCCAGCGCAGCCCTTTGCAGGGTCATCACCTCGTTGGCACTGATGTTTCCGGATACGGGCACGGCGACCTGCTGGCCGGCTACCGCGAAATGCCACAAGCTGTGTCCGAAGTAGG > NC_002947/1586683‑1586828 GCAGGTCGCCGTGCCCGTATCCGGAAACATCAGTGCCAACGAGGTGATGACCCTGCAAAGGGCTGCGCTGGCTGGCGCAGGTATCACCATGCTGCCAACCTACCAGGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGC < 1:134351/149‑1 AACCTACCAGGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGGTAGGTTGGCAGCATGGTGATACCTGCGCCAGCCAGCGCAGCCCTTTGCAGGGTCATCACCTCGTTGGCACTGATGTTTCCGGATACGGGCAC > 6:65162/1‑149 GGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGGTAGGTTGGCAGCATGGTGATACCTGCGCCAGCCAGCGCAGCCCTTTGCAGGGTCATCACCTCGTTGGCACTGATGTTTCCGGATACGGGCACGGCGACCTG > 3:6132/1‑149 GGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGGTAGGTTGGCAGCATGGTGAAACCTGCGCCAGCCAGCGCAGCCCTTTGCAGGGTCATCACCTCGTTGGCACTGATGTTTCC < 7:88757/128‑1 GGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGGTAGGTTGGCAGCATGGTGAAACCTGCGCCAGCCAGCGCAGCCCTTTGCAGGGTCATCACCTCGTTGGCACTGATGTTTCC > 8:88757/1‑128 GCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGGTAGGTTGGCAGCATGGTGATACCTGCGCCAGCCAGCGCAGCCCTTTGCAGGGTCATCACCTCGTTGGCACTGATGTTTCCGGATACGGGCACGGCGACCTGC > 6:219354/1‑149 CCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTGGTAGGTTGGCAGCATGGTGATACCTGCGCCAGCCAGCGCAGCCCTTTGCAGGGTCATCACCTCGTTGGCACTGATGTTTCCGGATACGGGCACGGCGACCTGCTGGCCGGCTA < 4:6132/149‑1 GCCTGGTAGGTTGCCAGCATGGTGATACCTGCGCCAGCCAGCGCAGCCCTTTGGAGGGTCATCACGTCGATGGCACTGATGTTTCCGGATACGGGCACGGCGCCCTGCTGGCCGGCTACCGCGAAATGCCAAAAGCTGTGTCAGAAG > 5:299736/1‑147 CTGGTAGGTTGGCAGCATGGTGATACCTGCGCCAGCCAGCGCAGCCCTTTGCAGGGTCATCACCTCGTTGGCACTGATGTTTCCGGATACGGGCACGGCGACCTGCTGGCCGGCTACCGCGAAATGCCACAAGCTGTGTCCGAAGTAGG < 8:277589/149‑1 GCAGGTCGCCGTGCCCGTATCCGGAAACATCAGTGCCAACGAGGTGATGACCCTGCAAAGGGCTGCGCTGGCTGGCGCAGGTATCACCATGCTGCCAACCTACCAGGCCGCAGACGCCATACGCCGGGGTGAACTGGTGCGTCTGCTGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1586785‑1586634 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgGTAGGTTGGCAGCATGGTGATACCTGCGCCAGCCAGCGCAGCCCTTTGCAGGGTCATCACCTCGTTGGCACTGATGTTTCCGGATACGGGCACGGCGACCTGCTGGCCGGCTACCGCGAAATGCCACAAGCTGTGTCCGAAGTAGG > NC_002947/1586683‑1586828 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |