New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1731324 | 34 (0.560) | 4 (0.070) | 4/250 | NT | 10.8% | coding (2546/2592 nt) | PP_1526 | beta‑(1‑3)‑glucosyl transferase |
? | NC_002947 | = 1731346 | 34 (0.600) | coding (2524/2592 nt) | PP_1526 | beta‑(1‑3)‑glucosyl transferase |
GGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1731173‑1731324 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcgCTGGTGATGGCGTTCCTGTCGTCGCTGCCCAAGCCCGCAGAAAAGGCTGCCCAAGCGCAGCAGGCTTGAAGTTGCCTG‑GGCCGACCTGTGCAGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTG < NC_002947/1731346‑1731199 GGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCA > 8:276478/1‑149 GCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGCTGGTGATGGCGTTCCTGTCGTCGCTGC < 3:213196/81‑1 GCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGCTGGTGATGGCGTTCCTGTCGTCGCTGC > 4:213196/1‑81 TTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGCTGGTGATGGCGTTCCTGTCGTCGCTGCCC > 5:241984/1‑78 TTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCGCTGGTGATGGCGTTCCTGTCGTCGCTGCCC < 6:241984/78‑1 GCAGCGCTGGTGATGGCGTTCCTGTCGGCGCTGCCCAAGCCCGCAGAAAAGGCTGCCCAAGCGCAGCAGGCTTGAAGTTGCCTG‑GGCCGACCTGTGCAGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAG < 1:284583/149‑1 CGCTGGTGATGGCGTTCCTGTCGTCGCTGCCCAAGCCCGCAGAAAAGGCTGCCCAAGCGCAGCAGGCTTGAAGTTGCCTGCGGCCGACCTGTGCAGCCCATTCGCGGGCA < 1:220160/110‑1 CGCTGGTGATGGCGTTCCTGTCGTCGCTGCCCAAGCCCGCAGAAAAGGCTGCCCAAGCGCAGCAGGCTTGAAGTTGCCTG‑GGCCGACCTGTGCAGCCCATTCGCGGGCA > 2:220160/1‑109 GCTGGTGATGGCGTTCCTGTCGTCGCTGCCCAAGCCCGCAGAAAAGGCTGCCCAAGCGCAGCAGGCTTGAAGTTGCCTG‑GGCCGACCTGTGCAGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTG < 4:33950/149‑1 GGGCACGCCCGCTCCCACAGGTACTGCACAGCTCTGAACGCCTGTGCCAAGCCGGTGGGAGCGGGCGTGCCCGCGAATGGGCTGCACAGGTCGGCCCAGGCAACTTCAAGCCTGCTGCGCTTGGGCAGCCTTTTCTGCGGGCTTGGGCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1731173‑1731324 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcagcgCTGGTGATGGCGTTCCTGTCGTCGCTGCCCAAGCCCGCAGAAAAGGCTGCCCAAGCGCAGCAGGCTTGAAGTTGCCTG‑GGCCGACCTGTGCAGCCCATTCGCGGGCACGCCCGCTCCCACCGGCTTGGCACAGGCGTTCAGAGCTGTG < NC_002947/1731346‑1731199 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |