| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1889257 = | 68 (1.130) | 4 (0.070) | 4/248 | NT | 6.4% | coding (1016/3480 nt) | PP_1695 | sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator |
| ? | NC_002947 | 1889310 = | 53 (0.940) | coding (963/3480 nt) | PP_1695 | sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator | |||||
CTGGCACTGGCCGCGCTGTTCGTGGTGCCGATTGCCCTGGCCGGGCAGATGCTGCTGCCCGGCACGGTGATCTCCGACTCGTTCGTCATCAGCCTGCCCCTGGCCGAGGCGCACCCGAGCCTTGCCCTGCTGGCGTTCATCGGCGGTGCCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1889411‑1889257‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTC > NC_002947/1889310‑1889456 CTGGCACTGGCCGCGCTGTTCGTGGTGCCGATTGCCCTGGCCGGGCAGATGCTGCTGCCCGGCACGGTGATCTCCGACTCGTTCGTCATCAGCCTGCCCCTGGCCGAGGCGCACCCGAGCCTTGCCCTGCTGGCGTTCATCGGCGGTGC > 5:170494/1‑149CTGGCACTGGCCGCGCTGTTCGTGGTGCCGATTGCCCTGGCCGGGCAGATGCTGCTGCCCGGCACGGTGATCTCCGACTCGTTCGTCATCAGCCTGCCCCTGGCCGAGGCGCACCCGAGCCTTGCCCTGCTGGCGTTCATCGGCGGTGC > 5:370315/1‑149 TGGCACTGGCCGCGCTGTTCGTGGTGCCGATTGCCCTGGTCGGGCAGATGCTGCTGCCCGGCACGGTGATCTCCGACTCGTTCGTCATCAGCCTGCCCCTGGCCGAGGCGCACCCGAGCCTTGCACTGCTGGCGTTCATCGGCGGTGCC > 2:80117/1‑149 ACTGGCCGCGCTCTTCGTGGTGCCGATTGCCCTGGCCGGGCAGATGCTCCTGCCCGGCACCGTGATCTCCGACTCGTTCGTCATCAGCCTGCCCCTGGCCGAGGCGCACCCCAGCCTTGCCCTGCTGGCGATCATCGGCGGTGCCTCGG > 5:354750/1‑149 CTGGCCGCGCTGTTCGTGGTGCCGATTGCCCTGGCCGGGCAGATGCTGCTGCCCGGCACGGTGATCTCCGACTCGTTCGTCATCAGCCTGCCCCTGGCCGAGGCGCACCCGAGCCTTGCCCTGCTGGCGTTCATCGGCGGTGCCTCGGC < 4:111577/149‑1 GCCCCTGGCCGAGGCGCACCCGAGCCTTGCCCTGCTGGCGTTCATCGGCGGTGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCG > 4:138301/1‑149 GGCCGAGGCGCACCCGAGCCTTGCCCTGCTGGCGTTCATCGGCGGTGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACA > 1:83451/1‑140 GGCCGAGGCGCACCCGAGCCTTGCCCTGCTGGCGTTCATCGGCGGTGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACA < 2:83451/140‑1 GCGCACCCGAGCCTTGCCCTGCTGGCGTTCATCGGCGGTGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAG < 3:138301/149‑1 ctCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCT < 4:275331/147‑1 CTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCG < 7:270841/149‑1 GGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGTAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTT < 6:249801/149‑1 GGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTT > 4:265946/1‑149 CCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTC > 1:75649/1‑148 CTGGCACTGGCCGCGCTGTTCGTGGTGCCGATTGCCCTGGCCGGGCAGATGCTGCTGCCCGGCACGGTGATCTCCGACTCGTTCGTCATCAGCCTGCCCCTGGCCGAGGCGCACCCGAGCCTTGCCCTGCTGGCGTTCATCGGCGGTGCCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1889411‑1889257‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTC > NC_002947/1889310‑1889456 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |