New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1889257 =68 (1.130)4 (0.070) 4/248 NT 6.4% coding (1016/3480 nt) PP_1695 sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator
?NC_002947 1889310 = 53 (0.940)coding (963/3480 nt) PP_1695 sodium‑solute symporter/two‑component system sensor histidine kinase/response regulator

GGCGTTGTTGCGGCGCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTC  >  NC_002947/1889163‑1889456
                                                                                                                                                   |                                                                                                                                                  
ggCGTTGTTGCGGCGCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCa                                                                                                                                                   <  8:324781/149‑1 (MQ=255)
ggCGTTGTTGCGGCGCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCa                                                                                                                                                   <  8:171881/149‑1 (MQ=255)
 gCGTTGTTGCGGCGCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAg                                                                                                                                                  <  5:127934/149‑1 (MQ=255)
  cGTTGTTGCGGCGCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAgg                                                                                                                                                 <  6:352196/149‑1 (MQ=255)
  cGTTGTTGCGGCGCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAgg                                                                                                                                                 <  4:304368/149‑1 (MQ=255)
   gttgttGCGGCGCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAggg                                                                                                                                                >  1:142292/1‑149 (MQ=255)
     cgctgttcgtggtgccgattgccctggccgggcagatgctgctgcccggcacggtgatctccgactcgttcgtcatcagcctgcccctgGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGc                                                                                                                                              >  4:138301‑M1/90‑149 (MQ=255)
       ttgCGGCGCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAg                                                                                                                                            >  1:42252/1‑149 (MQ=255)
        tgttcgtggtgccgattgccctggccgggcagatgctgctgcccggcacggtgatctccgactcgttcgtcatcagcctgcccctgGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGcc                                                                                                                                                    >  1:83451‑M1/87‑140 (MQ=255)
        tgttcgtggtgccgattgccctggccgggcagatgctgctgcccggcacggtgatctccgactcgttcgtcatcagcctgcccctgGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGcc                                                                                                                                                    <  2:83451‑M1/54‑1 (MQ=255)
         gcggcgCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGc                                                                                                                                          >  6:370315/1‑149 (MQ=255)
                 gcagcCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGac                                                                                                                                   >  6:375798/1‑148 (MQ=255)
                  cagcCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGacg                                                                                                                                  >  8:105270/1‑148 (MQ=255)
                   agcCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGacgaa                                                                                                                                <  3:307023/149‑1 (MQ=255)
                    gcCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGacgaac                                                                                                                               >  3:148418/1‑149 (MQ=255)
                      cAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGacgaacga                                                                                                                             <  6:12700/149‑1 (MQ=255)
                       aGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAg                                                                                                                            >  5:59036/1‑149 (MQ=255)
                          gcagcagcaTGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCg                                                                                                                         <  4:152403/149‑1 (MQ=255)
                            agcagcaTGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGga                                                                                                                       <  8:106384/149‑1 (MQ=255)
                                gcaTGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGAt                                                                                                                    >  7:2690/1‑148 (MQ=255)
                                gcaTGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGAt                                                                                                                    >  6:52560/1‑148 (MQ=255)
                                gcaTGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATc                                                                                                                   <  8:304044/149‑1 (MQ=255)
                                     tCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGt                                                                                                              <  2:133544/149‑1 (MQ=255)
                                       gTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGc                                                                                                            <  2:142292/149‑1 (MQ=255)
                                                cATTGTCGACAACGCCACTGCCTCGAAGATCACCATGCCGGTAGCCGCCGAGGCACGGGCGATGAACGCCATCAGGGCAAGGCTCGGGTGCGCCTCGGCCATTGGCATGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgcagca                                                                                                   <  8:273664/149‑1 (MQ=255)
                                                cATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCGAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGTTCACCGTGCCGGgcagca                                                                                                   <  6:59036/149‑1 (MQ=255)
                                                cATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGCCTGATGACCAACGCGTCGGAGATCACCCTCCCGGgcagca                                                                                                   >  6:354750/1‑149 (MQ=255)
                                                      cGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCt                                                                                             >  7:349168/1‑149 (MQ=255)
                                                       gACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTg                                                                                            >  8:288158/1‑149 (MQ=255)
                                                         cAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGcc                                                                                          <  2:42252/149‑1 (MQ=255)
                                                            cGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACAGCCGATGAACGCCAGCAGGTCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGTCAGCAGCATCTGCCCg                                                                                        <  2:169557/148‑1 (MQ=255)
                                                             gCCACGGCCTCGACGATCACCCTGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGc                                                                                      <  4:8173/149‑1 (MQ=255)
                                                             gCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGc                                                                                      >  3:275331/1‑149 (MQ=255)
                                                               cACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgca                                                                                                      <  4:29037/131‑1 (MQ=255)
                                                               cACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGgca                                                                                                      >  3:29037/1‑131 (MQ=255)
                                                               cACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGc                                                                                      >  5:136602/1‑147 (MQ=255)
                                                               cACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCa                                                                                    <  4:148418/149‑1 (MQ=255)
                                                                 cGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAgg                                                                                  <  3:268979/149‑1 (MQ=255)
                                                                 cGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGGGCCGGGCAGATGCTGCTGCCCGGcacgg                                                                                  <  5:375798/149‑5 (MQ=255)
                                                                  ggCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAggg                                                                                 <  6:136602/149‑1 (MQ=255)
                                                                   gCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGc                                                                                <  3:38792/149‑1 (MQ=255)
                                                                      tCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGTAAt                                                                             >  5:249801/1‑149 (MQ=255)
                                                                           gaTCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCTGGCCGGGCagatgctg                                                                        <  7:105270/149‑8 (MQ=255)
                                                                                ccATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCa                                                                                                                  >  4:351849/1‑102 (MQ=255)
                                                                                ccATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGcaccac                                                                    >  6:170494/1‑148 (MQ=255)
                                                                                 cATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATCACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACg                                                                   >  8:48435/1‑148 (MQ=255)
                                                                                       gcccctggccgaggcgcacccgagccttgccctgctggcgttcatcggcggtgcctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAgcg                                                            >  4:138301‑M2/61‑149 (MQ=255)
                                                                                         tAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGcgcg                                                          <  7:288158/149‑1 (MQ=255)
                                                                                           gccgccGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGc                                                        <  7:48435/149‑1 (MQ=255)
                                                                                             ggccgaggcgcacccgagccttgccctgctggcgttcatcggcggtgcctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACa                                                               >  1:83451‑M2/55‑140 (MQ=255)
                                                                                             ggccgaggcgcacccgagccttgccctgctggcgttcatcggcggtgcctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACa                                                               <  2:83451‑M2/86‑1 (MQ=255)
                                                                                              GCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAg                                                     <  4:111577‑M1/149‑1 (MQ=255)
                                                                                               CCGAGGCACCGCCGATGATCGCCAGCAGGGCAAGGCTGGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACGGTGCCGGGCAGGAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAAGAGCGCGGCCAGt                                                    >  5:354750‑M1/1‑149 (MQ=255)
                                                                                                   GGCACCGCCGATGAACGCCAGCAGTGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGACCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCa                                                >  2:80117‑M1/1‑149 (MQ=255)
                                                                                                    gcgcacccgagccttgccctgctggcgttcatcggcggtgcctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAg                                               <  3:138301‑M2/102‑1 (MQ=255)
                                                                                                    GCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAg                                               >  5:170494‑M1/1‑149 (MQ=255)
                                                                                                    GCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAg                                               >  5:370315‑M1/1‑149 (MQ=255)
                                                                                                      aCCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAgg                                              >  8:270841/1‑148 (MQ=255)
                                                                                                      aCCGCCGATGAACGCCAGCAGGACAAGGCTCGGGTGCGCCTCGTCCAGGGGCAGGCTGATGACGAACGAGTCGGACATCACCGTGACGGGCAGCAGCATATGCCCGGCCAGCCCAATCGGCACCACCAACAGCGCGGCCAGTGCCAgg                                              >  5:267959/1‑148 (MQ=255)
                                                                                                      aCCGCCGATGAACGCCAGCAGGACAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAgg                                              >  3:59975/1‑148 (MQ=255)
                                                                                                            gATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCg                                       >  5:314819/1‑149 (MQ=255)
                                                                                                             aTGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCgg                                      <  8:116147/149‑1 (MQ=255)
                                                                                                             aTGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCgg                                      >  1:343256/1‑149 (MQ=255)
                                                                                                             aTGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCgg                                      >  5:261113/1‑149 (MQ=255)
                                                                                                                  cGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATa                                 >  3:197689/1‑149 (MQ=255)
                                                                                                                   gCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGAAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATAc                                >  8:251288/1‑149 (MQ=255)
                                                                                                                           ggCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGACGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCCCCACGAACAGCGCGGCCATTGCCAGGTACATCGGGAATACCCAgagcg                        >  3:242911/1‑149 (MQ=255)
                                                                                                                              aaGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCa                                                      >  5:197523/1‑116 (MQ=255)
                                                                                                                              aaGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCa                                                      <  6:197523/116‑1 (MQ=255)
                                                                                                                                   tCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGgcg                 >  7:167321/1‑148 (MQ=255)
                                                                                                                                     gggTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCaa              <  6:350486/149‑1 (MQ=255)
                                                                                                                                          ctcctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCt         <  4:275331‑M2/140‑1 (MQ=255)
                                                                                                                                             ctcggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCg      <  7:270841‑M2/143‑1 (MQ=255)
                                                                                                                                                ggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGTAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGtt   <  6:249801‑M2/146‑1 (MQ=255)
                                                                                                                                                ggcCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGtt   >  4:265946‑M2/4‑149 (MQ=255)
                                                                                                                                                  cCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTc  >  1:75649‑M2/2‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GGCGTTGTTGCGGCGCAGCAGCCAGGGCAGCAGCATGTCGTTGGACACCATGGTCGACAACGCCACGGCCTCGACGATCACCATGCCGGTAGCCGCCGAGGCACCGCCGATGAACGCCAGCAGGGCAAGGCTCGGGTGCGCCTCGGCCAGGGGCAGGCTGATGACGAACGAGTCGGAGATCACCGTGCCGGGCAGCAGCATCTGCCCGGCCAGGGCAATCGGCACCACGAACAGCGCGGCCAGTGCCAGGTACATCGGGAATACCCAGCGCGCCAGGCGCAAGTCCTGCGGTTC  >  NC_002947/1889163‑1889456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.