| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2308824 = | 55 (0.910) | 4 (0.070) | 3/258 | NT | 7.0% | coding (246/957 nt) | PP_2031 | hypothetical protein |
| ? | NC_002947 | 2308888 = | 52 (0.880) | coding (182/957 nt) | PP_2031 | hypothetical protein | |||||
CAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCGCGGCGTGGACTTCGACCAGGTGCGCGTTTACCAGGCCGGCGATGATGTGCGCAACATCGACTGGCGTGTCACTGCGCGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2308973‑2308824‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTT > NC_002947/2308888‑2309035 CAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCGCGGCGTGGACTTCGACCAGGTGCGCGTTTACCAGGCCGGCGATGATGTGCGCAACATCGACTGGCGTGTCACTGCGCGTAC > 7:110717/1‑149 GACCAGGTGCGCGTTTACCAGGCCGGCGATGATGTGCGCAACATCGACTGGCGTGTCACTGCGCGTACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAA > 5:378644/1‑149 CCAGGTGCGCGTTTACCAGGCCGGCGATGATGTGCGCAACATCGACTGGCGTGTCACTGCGCGTACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAACA < 6:378644/149‑1 CCAGGTGCGCGTTTACCAGGCCGGCGATGATGTGCGCAACATCGACTGGCGTGTCACTGCGCGTACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAA > 2:49560/1‑147 CCAGGTGCGCGTTTACCAGGCCGGCGATGATGTGCGCAACATCGACTGGCGTGTCACTGCGCGTACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAA > 2:55081/1‑147 ACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTG > 5:322791/1‑149 ACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTG < 6:9747/149‑1 CTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTT < 5:186373/149‑1 CAGCTGTTTTCCAAGCCCGGCCAGCGCAGCCCACTGGTGGGCCTGCACCATTCCAAGCTGCGCGGGCGCGGCGTGGACTTCGACCAGGTGCGCGTTTACCAGGCCGGCGATGATGTGCGCAACATCGACTGGCGTGTCACTGCGCGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2308973‑2308824‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTGGAAAACAGCTGGATTTCGCGCACGCGGTGGCGCATGTCGATCAGCTCGGCAAGGCCAATGCGGATGCCGTGTT > NC_002947/2308888‑2309035 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |