New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2308824 =55 (0.910)4 (0.070) 3/258 NT 7.0% coding (246/957 nt) PP_2031 hypothetical protein
?NC_002947 2308888 = 52 (0.880)coding (182/957 nt) PP_2031 hypothetical protein

CTGCCCAGCCGAACAGCGCCGCAGCCTGGGCCGCCAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTG  >  NC_002947/2308676‑2308962
                                                                                                                                                    |                                                                                                                                          
cTGCCCAGCCGAACAGCGCCGCAGCCTGGGCCGCCAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTgg                                                                                                                                            <  7:255453/149‑1 (MQ=255)
cTGCCCAGCCGAACAGCGCCGCAGCCTGGGCCGCCAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTgg                                                                                                                                            <  1:5628/149‑1 (MQ=255)
aacacggcatccgcattggccttgccgagctgatcgacatgcgccaccgcgtgcgcgaaatccagctgttttccaagcccggccagcgcagcccactggtgggcctgcaccattccaagctgcgcgggcgcggcgtggacttcgaccag                                                                                                                                            <  5:186373‑M1/1‑1 (MQ=255)
  cacggcatccgcattggccttgccgagctgatcgacatgcgccaccgcgtgcgcgaaatccagctgttttccaagcccggccagcgcagcccactggtgggcctgcaccattccaagctgcgcgggcgcggcgtggacttcgaccaGGt                                                                                                                                          <  6:9747‑M1/3‑1 (MQ=255)
  cacggcatccgcattggccttgccgagctgatcgacatgcgccaccgcgtgcgcgaaatccagctgttttccaagcccggccagcgcagcccactggtgggcctgcaccattccaagctgcgcgggcgcggcgtggacttcgaccaGGt                                                                                                                                          >  5:322791‑M1/147‑149 (MQ=255)
          gAACAGCGCCGCAGCCTGGGCCGCCAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAg                                                                                                                                  >  8:144793/1‑149 (MQ=255)
           aaCAGCGCCGCAGCCTGGGCCGCCAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGt                                                                                                                                 >  3:28749/1‑149 (MQ=255)
                 gccgcAGCCTGGGCCGCCAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACg                                                                                                                           <  4:28749/149‑1 (MQ=255)
                   cgcAGCCTGGGCCGCCAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGAGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGc                                                                                                                          >  6:359659/1‑148 (MQ=255)
                        ccTGGGCCGCCAGCACGGACTTGAACATAAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTTCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGCGTACGCGCAGTGACACGCCAGTc                                                                                                                     >  8:168117/1‑148 (MQ=255)
                           gggCCGCCAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATg                                                                                                                 >  8:204851/1‑149 (MQ=255)
                              ccgccAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTg                                                                                                              <  6:63385/149‑1 (MQ=255)
                                 ccAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTgcg                                                                                                            >  3:363968/1‑148 (MQ=255)
                                            ttGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATg                                                                                                                 <  5:378320/132‑1 (MQ=255)
                                            ttGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATg                                                                                                                 >  6:378320/1‑132 (MQ=255)
                                             tGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCg                                                                                               >  2:155585/1‑149 (MQ=255)
                                              gAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCgg                                                                                              >  1:132177/1‑149 (MQ=255)
                                               aaCATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTCGAACAGCTTGGTGTGCGGCTCCTGCCTACGCGCAGTGACACGCCAGTCGATGTTGCGCACAACATCGCCGGc                                                                                             >  2:369310/1‑149 (MQ=255)
                                                       cccTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTaaa                                                                                     >  7:154964/1‑149 (MQ=255)
                                                        ccTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAAc                                                                                    <  1:10903/149‑1 (MQ=255)
                                                              ccGAAGAAAAGCCGTTGGCGTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCCTCGCCGGCCTGGTAAACGCGCAc                                                                              >  8:297227/1‑149 (MQ=255)
                                                               cGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCAcc                                                                             >  5:339956/1‑149 (MQ=255)
                                                                gaagaaAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCt                                                                            >  2:355125/1‑149 (MQ=255)
                                                                  tgttttccaagcccggccagcgcagcccactggtgggcctgcaccattccaagctgcgcgggcgcggcgtggacttcgaccaGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTgg                                                                          <  6:378644‑M1/67‑1 (MQ=255)
                                                                  agaaAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTgg                                                                          <  5:336779/149‑1 (MQ=255)
                                                                    ttttccaagcccggccagcgcagcccactggtgggcctgcaccattccaagctgcgcgggcgcggcgtggacttcgaccaGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTgg                                                                          >  2:55081‑M1/81‑147 (MQ=255)
                                                                    ttttccaagcccggccagcgcagcccactggtgggcctgcaccattccaagctgcgcgggcgcggcgtggacttcgaccaGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTgg                                                                          >  2:49560‑M1/81‑147 (MQ=255)
                                                                    ttttccaagcccggccagcgcagcccactggtgggcctgcaccattccaagctgcgcgggcgcggcgtggacttcgaccaGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTc                                                                        >  5:378644‑M1/81‑149 (MQ=255)
                                                                      aaGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCg                                                                       >  1:254663/1‑148 (MQ=255)
                                                                         ccGTTGGCTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTc                                                                  >  6:36843/1‑149 (MQ=255)
                                                                           gTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGACCTGGTAAACGCGCACCTGGTCGAAGt                                                                   >  5:199829/1‑147 (MQ=255)
                                                                           gTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGACCTGGTAAACGCGCACCTGGTCGAAGt                                                                   <  6:199829/147‑1 (MQ=255)
                                                                                   tGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCAcgccgc                                                          <  4:363968/148‑1 (MQ=255)
                                                                                      tCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGccgcgccc                                                      >  3:154211/1‑149 (MQ=255)
                                                                                      tCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGccgcgccc                                                      >  7:164911/1‑149 (MQ=255)
                                                                                           gaGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCa                                                 <  6:119027/149‑1 (MQ=255)
                                                                                              gATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCt                                              >  6:100739/1‑149 (MQ=255)
                                                                                              gATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCt                                              <  7:204851/149‑1 (MQ=255)
                                                                                                tGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTg                                            <  1:355125/149‑1 (MQ=255)
                                                                                                tGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTg                                            >  2:43663/1‑149 (MQ=255)
                                                                                                   aGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGaa                                         >  5:9747/1‑149 (MQ=255)
                                                                                                    gATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAAt                                        >  8:110717/1‑149 (MQ=255)
                                                                                                     aTCGGCCGCTGGCGTTCTTCGGGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCTCCGGCCTGGTAAACGCGCACCTGGTCGAAGTGCACGCCGCGCCCGCGCAGCTTTGAATg                                       <  5:359659/149‑1 (MQ=255)
                                                                                                     aTCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATg                                       <  5:36843/149‑1 (MQ=255)
                                                                                                        ggCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTg                                    <  7:168117/149‑1 (MQ=255)
                                                                                                           cGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAg                                 <  2:254663/149‑1 (MQ=255)
                                                                                                             cTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGGGCAGCTTGGAATGGTGCAGGc                               <  4:59747/149‑1 (MQ=255)
                                                                                                                gcgTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCcca                            >  8:202331/1‑149 (MQ=255)
                                                                                                                      ttcGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTg                      >  3:352416/1‑149 (MQ=255)
                                                                                                                        cGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTg                      <  6:339956/147‑1 (MQ=255)
                                                                                                                         gTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACTGGTGGGc                   >  7:164892/1‑149 (MQ=255)
                                                                                                                         gTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTggg                    <  6:62175/148‑1 (MQ=255)
                                                                                                                           ggAACCTCTTGGTGTGCGGCGCCTTGGTACGCGGAGTGACACGCATGTCGATCTTGCGCACCTCATCGCCGGCCTGGTAAACGCGCTCCTGGTCGAAGTCCAAGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTg                 <  6:354042/149‑1 (MQ=255)
                                                                                                                            gAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTg                                            >  6:303657/1‑121 (MQ=255)
                                                                                                                            gAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTg                                            <  5:303657/121‑1 (MQ=255)
                                                                                                                            gAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTg                 <  1:160129/148‑1 (MQ=255)
                                                                                                                             aaCAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTgcg               <  2:132177/149‑1 (MQ=255)
                                                                                                                             aaCAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGCCCACTGGTGGGcctgca              <  6:108686/149‑6 (MQ=255)
                                                                                                                              aCAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACTGGTGGGcctgc               <  8:164892/148‑5 (MQ=255)
                                                                                                                                  cTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCccac                           <  4:175178/132‑1 (MQ=255)
                                                                                                                                  cTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCccac                           >  3:175178/1‑132 (MQ=255)
                                                                                                                                       tgtgCGGCTCCTGTGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCCTCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCTCGCCCTCGCAGCTGGGAATGGTGCAGGCACCCCAGTGGGCTGCGCTGGCCGGGc     >  7:238914/1‑149 (MQ=255)
                                                                                                                                       tgtgCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGc     <  1:155585/149‑1 (MQ=255)
                                                                                                                                          gCGGCTCCTGGGGCAGCGCAGTGACACGCCAGTCTCTGGTGCGCACATCAGCGCCGGCCTGGTAAACGCGCACCTGGTCGCAGGCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTTGGCTGCGCTGGCCGGGCTTg  <  8:238914/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                          
CTGCCCAGCCGAACAGCGCCGCAGCCTGGGCCGCCAGCACGGACTTGAACATCAGCCCTGAGCCGAAGAAAAGCCGTTGGCTTTGCTCGACGAGGATGAAGATCGGCCGCTCGCGTTCTTCGTGGAACAGCTTGGTGTGCGGCTCCTGGGTACGCGCAGTGACACGCCAGTCGATGTTGCGCACATCATCGCCGGCCTGGTAAACGCGCACCTGGTCGAAGTCCACGCCGCGCCCGCGCAGCTTGGAATGGTGCAGGCCCACCAGTGGGCTGCGCTGGCCGGGCTTG  >  NC_002947/2308676‑2308962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.