| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2385585 = | 62 (1.030) | 4 (0.070) | 4/256 | NT | 6.8% | coding (293/576 nt) | PP_2093 | two‑component system response regulator NasT |
| ? | NC_002947 | 2385633 = | 50 (0.860) | coding (245/576 nt) | PP_2093 | two‑component system response regulator NasT | |||||
ACGTGGTGCTGATCGATACCGACTCGCCAGACCGCGATGTGATGGAACAGGTAGTGCTGGTCAGCCGTGACCAGCCGCGGCCCATCGTGTTGTTCACCGACGAGCACGACCCCGGGATGATGCGCCAGGCGATCCAGGCAGGGGTCAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2385735‑2385585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcTCGTCGGTGAACAACACGATGGGCCGCGGCTGGTCACGGCTGACCAGCA‑CTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCA > NC_002947/2385633‑2385765 ACGTGGTGCTGATCGATACCGACTCGCCAGACCGCGATGTGATGGAACAGGTAGTGCTGGTCAACCGTGACCAGCCGCGGCCCATCGTGTTGTTCACCGACGAGCACGACCCCGGGATGATGCGCCAGGCGATCCAGGCAGGGGTCAGT < 6:249770/149‑1 CGACGAGCACGACCCCGGGATGATGCGCCAGGCGATCCAGGCAGGGGTCAGTGCTCGTCGGTGAACAACACGATGGGCCGCGGCTGGTCACGGCTGACCAGCA‑CTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAG > 2:224060/1‑149 GCACGACCCCGGGATGATGCGCCAGGCGATCCAGGCAGGGGTCAGTGCTCGTCGGTGAACAACACGATGGGCCGCGGCTGGTCACGGCTGACCAGCACCTACCTGTTCCATCACATCGCGGTCTGGCGAGTCG < 1:247237/133‑1 GCACGACCCCGGGATGATGCGCCAGGCGATCCAGGCAGGGGTCAGTGCTCGTCGGTGAACAACACGATGGGCCGCGGCTGGTCACGGCTGACCAGCA‑CTACCTGTTCCATCACATCGCGGTCTGGCGAGTCG > 2:247237/1‑132 AGGCAGGGGTCAGTGCTCGTCGGTGAACAACACGATGGGCCGCGGCTGGTCACGGCTGACCAGCA‑CTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCA < 1:224060/149‑1 ACGTGGTGCTGATCGATACCGACTCGCCAGACCGCGATGTGATGGAACAGGTAGTGCTGGTCAGCCGTGACCAGCCGCGGCCCATCGTGTTGTTCACCGACGAGCACGACCCCGGGATGATGCGCCAGGCGATCCAGGCAGGGGTCAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2385735‑2385585‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcTCGTCGGTGAACAACACGATGGGCCGCGGCTGGTCACGGCTGACCAGCA‑CTACCTGTTCCATCACATCGCGGTCTGGCGAGTCGGTATCGATCAGCACCACGTCCGGGCGCACCGTTTCGACGCAGGCGGGCA > NC_002947/2385633‑2385765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |