| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2417879 = | 41 (0.680) | 3 (0.050) | 3/254 | NT | 6.4% | coding (914/1764 nt) | PP_2119 | ABC transporter permease/ATP‑binding protein |
| ? | NC_002947 | 2417925 = | 49 (0.850) | coding (960/1764 nt) | PP_2119 | ABC transporter permease/ATP‑binding protein | |||||
AGCTCGATATGACCGCTGGCCCGCGGCTGCGGCAGCACCTGCGCCACGTCGGGGGGCAGGATGGCACTGCGCGCGGCCAACAGTTCGGCAATGCGCTCGGCTGCACCCGCGGCCCGTTGCAGCTCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2418008‑2417879‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGCTTACCCTTCACGGCCCACGGTGGCAGCTGTCGACGGCCTGAGCCTG > NC_002947/2417925‑2418072 AGCTCGATATGACCGCTGGCCCGCGGCTGCGGCAGCACCTGCGCCACGTCGGGGGGCAGGATGGCACTGCGCGCGGCCAACAGTTCGGCAATGCGCTCGGCTGCACCCGCGGCCCGTTGCAGCTCGC < 3:1634/127‑1AGCTCGATATGACCGCTGGCCCGCGGCTGCGGCAGCACCTGCGCCACGTCGGGGGGCAGGATGGCACTGCGCGCGGCCAACAGTTCGGCAATGCGCTCGGCTGCACCCGCGGCCCGTTGCAGCTCGC > 4:1634/1‑127 CAACAGTTCGGCAATGCGCTCGGCTGCACCCGCGGCCCGTTGCAGCTCGCCGAACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGT > 4:143144/1‑149 GTTCGGCAATGCGCTCGGCTGCACCCGCGGCCCGTTGCAGCTCGCCGAACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCG > 7:253886/1‑149 CAATGCGCTCGGCTGCACCCGCGGCCCGTTGCAGCTCGCCGAACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGCTTACC < 8:253886/149‑1 GCCGAACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGCTTACCCTTCACGGCCCACGGTGGCAGCTGTCGACGGCCTGA < 4:259335/148‑1 CCGAACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGCTTACCCTTCACGGCCCACGGTGGCAGCTGTCGCCGGCCTGAGC > 3:94491/1‑149 CCGAACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGCTTACCCTTCACGGCCCACGGTGGCAGCTGTCGACGGCCTGAG < 5:10742/148‑1 GAACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGCTTACCCTTCACGGCCCACGGTGGCAGCTGTCGACGGCCTGAGCCT < 6:107104/149‑1 AACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGCTTACCCTTCACGGCCCACGGTGGCAGCTGTCGACGGCCTGAGCCTG > 3:225710/1‑149 AGCTCGATATGACCGCTGGCCCGCGGCTGCGGCAGCACCTGCGCCACGTCGGGGGGCAGGATGGCACTGCGCGCGGCCAACAGTTCGGCAATGCGCTCGGCTGCACCCGCGGCCCGTTGCAGCTCGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2418008‑2417879‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaACTGTTGGCCGCGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGCTTACCCTTCACGGCCCACGGTGGCAGCTGTCGACGGCCTGAGCCTG > NC_002947/2417925‑2418072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |