New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2417879 =	41 (0.680)	3 (0.050)	3/254	NT	6.4%	coding (914/1764 nt)	PP_2119	ABC transporter permease/ATP‑binding protein
	?	NC_002947	2417925 =	49 (0.850)					coding (960/1764 nt)	PP_2119	ABC transporter permease/ATP‑binding protein

ATCGTGCTGGTGTTGGGGGCGGTGGGGGTGATGCTGTGGGTCGGCGGCATGGATGTGATCGCCGGGCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGC  >  NC_002947/2417731‑2418026                                                                                                                                                     |                                                                                                                                                     caggctcaggccgtcgacagctgccaccgtgggccgtgaagggtaagcgaacacgacctgttgcagctcgatatgaccgctggcccgcggctgcggcagcacctgcgccacgtcggggggcaggatggcactgcgcgcggccaacagtt                                                                                                                                                      >  3:225710‑M1/149‑149 (MQ=255)  aggctcaggccgtcgacagctgccaccgtgggccgtgaagggtaagcgaacacgacctgttgcagctcgatatgaccgctggcccgcggctgcggcagcacctgcgccacgtcggggggcaggatggcactgcgcgcggccaacagtTc                                                                                                                                                     <  6:107104‑M1/2‑1 (MQ=255)    gctcaggccggcgacagctgccaccgtgggccgtgaagggtaagcgaacacgacctgttgcagctcgatatgaccgctggcccgcggctgcggcagcacctgcgccacgtcggggggcaggatggcactgcgcgcggccaacagtTCgg                                                                                                                                                   >  3:94491‑M1/146‑149 (MQ=255)     ctcaggccgtcgacagctgccaccgtgggccgtgaagggtaagcgaacacgacctgttgcagctcgatatgaccgctggcccgcggctgcggcagcacctgcgccacgtcggggggcaggatggcactgcgcgcggccaacagtTCgg                                                                                                                                                   <  5:10742‑M1/4‑1 (MQ=255)      tcaggccgtcgacagctgccaccgtgggccgtgaagggtaagcgaacacgacctgttgcagctcgatatgaccgctggcccgcggctgcggcagcacctgcgccacgtcggggggcaggatggcactgcgcgcggccaacagtTCGGc                                                                                                                                                  <  4:259335‑M1/5‑1 (MQ=255)                                 gCTGTGGGTCGGCGGCATGGATGTGATCGCCGGGCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGcc                                                                                                                       >  1:114945/1‑148 (MQ=255)                                   tgtgGGTCGGCGGCATGGATGTGATCGCCGGGCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAg                                                                                                                    >  3:343902/1‑149 (MQ=255)                                     tgGGTCGGCGGCATGGATGTGATCGCCGGGCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAgcg                                                                                                                  <  1:62138/149‑1 (MQ=255)                                        gTCGGCGGCATGGATGTGATCGCCGGGCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCAt                                                                                                               >  3:327895/1‑149 (MQ=255)                                          ggtaagcgaacacgacctgttgcagctcgatatgaccgctggcccgcggctgcggcagcacctgcgccacgtcggggggcaggatggcactgcgcgcggccaacagtTCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTg                                                                                                             <  8:253886‑M1/42‑1 (MQ=255)                                                cgaacacgacctgttgcagctcgatatgaccgctggcccgcggctgcggcagcacctgcgccacgtcggggggcaggatggcactgcgcgcggccaacagtTCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAAc                                                                                                       >  7:253886‑M1/102‑149 (MQ=255)                                                 aTGGATGTGATCGCCGGGCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACt                                                                                                      >  4:73660/1‑149 (MQ=255)                                                     acgacctgttgcagctcgatatgaccgctggcccgcggctgcggcagcacctgcgccacgtcggggggcaggatggcactgcgcgcggccaacagtTCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTg                                                                                                  >  4:143144‑M1/97‑149 (MQ=255)                                                      tgtgATCGCCGGGCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTgg                                                                                                 <  7:131456/149‑1 (MQ=255)                                                         gATCGCCGGGCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCcg                                                                                              >  3:301067/1‑149 (MQ=255)                                                                gggCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAg                                                                                      <  4:343902/149‑1 (MQ=255)                                                                 ggCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACATCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGt                                                                                     <  2:316519/149‑1 (MQ=255)                                                                    gTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGc                                                                                   >  5:107104/1‑148 (MQ=255)                                                                      atatCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACt                                                                                                      <  4:329733/128‑1 (MQ=255)                                                                      atatCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACt                                                                                                      >  3:329733/1‑128 (MQ=255)                                                                      atatCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCAt                                                                                >  5:369171/1‑149 (MQ=255)                                                                      atatCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCAt                                                                                >  6:146182/1‑149 (MQ=255)                                                                      atatCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCAt                                                                                >  4:7310/1‑149 (MQ=255)                                                                         tCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCt                                                                             >  3:95652/1‑149 (MQ=255)                                                                           cGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGc                                                                           >  2:369679/1‑149 (MQ=255)                                                                                gCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGaccccc                                                                      >  2:249302/1‑149 (MQ=255)                                                                                        gcagcaTTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACgg                                                                                                                                      >  6:68365/1‑78 (MQ=255)                                                                                         cagcaTTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGgcg                                                             <  2:114945/149‑1 (MQ=255)                                                                                             aTTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAgg                                                         >  3:308669/1‑149 (MQ=255)                                                                                              ttCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGt                                                        >  7:353480/1‑149 (MQ=255)                                                                                                 gtgtTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGtgct                                                     <  3:7310/149‑1 (MQ=255)                                                                                                       tACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCg                                                 >  4:260253/1‑147 (MQ=255)                                                                                                         cAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGc                                             >  1:188859/1‑149 (MQ=255)                                                                                                           gCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCcg                                           >  6:10742/1‑149 (MQ=255)                                                                                                            ccTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCcgc                                          >  8:28142/1‑149 (MQ=255)                                                                                                             cTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCcgcg                                         <  1:249302/149‑1 (MQ=255)                                                                                                                aTCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGc                                      <  1:369679/149‑1 (MQ=255)                                                                                                                        cAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGt                               >  5:340195/1‑148 (MQ=255)                                                                                                                         aGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTACTGCCGCAGCCGCGGGCCAGCGGTCa                             >  1:316888/1‑149 (MQ=255)                                                                                                                            gcCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCatat                          <  5:146182/149‑1 (MQ=255)                                                                                                                             ccTTCGGTACCCTCAGTGAGGTGATCGGCGACCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCCGTGGCATCCTGCCCCCCGACGTGGCGCAGGTTCTGCCGCAGCCGCCGGCCAGCGGTCATATc                         >  7:180770/1‑149 (MQ=255)                                                                                                                                   gTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTg                   >  7:344166/1‑149 (MQ=255)                                                                                                                                    tACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGc                  <  4:301067/149‑1 (MQ=255)                                                                                                                                     aCCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGc                  >  5:279058/1‑148 (MQ=255)                                                                                                                                       ccTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGCCGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCaa                >  2:269732/1‑148 (MQ=255)                                                                                                                                       ccTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCaa                >  2:245426/1‑148 (MQ=255)                                                                                                                                       ccTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCaa                >  7:33857/1‑148 (MQ=255)                                                                                                                                         tCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAg             <  8:353480/149‑1 (MQ=255)                                                                                                                                           aGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAgg            <  4:164335/148‑1 (MQ=255)                                                                                                                                                ggTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGCGGCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCgtg       >  1:113866/1‑149 (MQ=255)                                                                                                                                                 gTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCt                    <  2:290881/134‑1 (MQ=255)                                                                                                                                                 gTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCt                    >  1:290881/1‑134 (MQ=255)                                                                                                                                                    aTCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCGCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCg   <  4:95652/148‑1 (MQ=255)                                                                                                                                                    aTCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCg   <  2:188859/148‑1 (MQ=255)                                                                                                                                                    aTCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGc  <  8:344166/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     ATCGTGCTGGTGTTGGGGGCGGTGGGGGTGATGCTGTGGGTCGGCGGCATGGATGTGATCGCCGGGCGTATATCCGCAGGCGAGCTGGCAGCATTCGTGTTCTACAGCCTGATCGTCGGCAGCGCCTTCGGTACCCTCAGTGAGGTGATCGGCGAGCTGCAACGGGCCGCGGGTGCAGCCGAGCGCATTGCCGAACTGTTGGCCGC‑GCGCAGTGCCATCCTGCCCCCCGACGTGGCGCAGGTGCTGCCGCAGCCGCGGGCCAGCGGTCATATCGAGCTGCAACAGGTCGTGTTCGC  >  NC_002947/2417731‑2418026

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.