New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2565610 =	54 (0.900)	3 (0.050)	3/258	NT	5.0%	coding (1342/1932 nt)	pctB	methyl‑accepting chemotaxis protein PctB
	?	NC_002947	2565690 =	61 (1.040)					coding (1262/1932 nt)	pctB	methyl‑accepting chemotaxis protein PctB

CCGCAACGCCGCAGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGCCGTGAAGTGGTTGAAGAAGCCATCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2565698‑2565610 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCTGTTCTTCAGACCCGATGATCGACGCATTGGACGCGCTGACCACTTTCTCCGAAAGGTCATGCACCAGGCGG  >  NC_002947/2565690‑2565836                                                                                                                                                                                                                                              CCGCAACGCCGCAGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGCCGTGAAGTGGTTGAAGAAGCCATCAGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTG                                                                                         >  8:137091/1‑149             AGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGCCGTGAAGTGGTTGAAGAAGCCATCAGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGT                                                                                                             >  5:102297/1‑117             AGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGCCGTGAAGTGGTTGAAGAAGCCATCAGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGT                                                                                                             <  6:102297/117‑1                                                                                        CGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCTGTTCTTCAGACCCGATGATCGACGCATTGGACGCGCTGACCACTTTCTCCGAAAGGTCATGCACCAGGCGG  <  8:232622/149‑1                                                                                                                                                                                                                                              CCGCAACGCCGCAGATGCTTCACAACATGCCAGCGGTGCCAGCGAACAGGCGCACGGTGGCCGTGAAGTGGTTGAAGAAGCCATCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2565698‑2565610 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGTGCGCATGCTCTGTTCTTCAGACCCGATGATCGACGCATTGGACGCGCTGACCACTTTCTCCGAAAGGTCATGCACCAGGCGG  >  NC_002947/2565690‑2565836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.