New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2565610 =54 (0.900)3 (0.050) 3/258 NT 5.0% coding (1342/1932 nt) pctB methyl‑accepting chemotaxis protein PctB
?NC_002947 2565690 = 61 (1.040)coding (1262/1932 nt) pctB methyl‑accepting chemotaxis protein PctB

GATGGCGGCGTTCAGTGCCAGCAGGTTGGTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGT  >  NC_002947/2565464‑2565754
                                                                                                                                                      |                                                                                                                                                
gATGGCGGCGTTCAGTGCCAGCAGGTTGGTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGgcg                                                                                                                                                 <  6:230358/148‑1 (MQ=255)
   ggcggcGTTCAGTGCCAGCAGGTTGGTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGa                                                                                                                                             >  4:172350/1‑149 (MQ=255)
   ccgcctggtgcatgacctttcggagaaagtggtcagcgcgtccaatgcgtcgatcatcgggtctgaagaacagagcatgcgcaccaacagcgtcgctgcggccatcaacgaactgggcgccgccacccaggaaatcgcccgcaacgccg                                                                                                                                                 <  8:232622‑M1/2‑1 (MQ=255)
         gTTCAGTGCCAGCAGGTTGGTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGctt                                                                                                                                       >  8:130478/1‑149 (MQ=255)
          ttCAGTGCCAGCAGGTTGGTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGcttc                                                                                                                                      <  1:109990/149‑1 (MQ=255)
              gTGCCAGCAGGTTGGTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCa                                                                                                                                  <  1:83149/149‑1 (MQ=255)
               tGCCAGCAGGTTGGTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCaa                                                                                                                                 <  3:220989/149‑1 (MQ=255)
                   agcagGTTGGTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCAc                                                                                                                             >  5:16203/1‑149 (MQ=255)
                            gTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGcc                                                                                                                    >  8:329250/1‑149 (MQ=255)
                             tCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCa                                                                                                                   >  7:283429/1‑149 (MQ=255)
                                 ctgAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGAGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGCGCAGTCATGGCGCTGATGGCATCTTCAACCACTTCACGGCCACCGt                                                                                                               >  1:305376/1‑149 (MQ=255)
                                    agaAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATgg                                                                                                                                          >  3:161888/1‑119 (MQ=255)
                                    agaAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATgg                                                                                                                                          <  4:161888/119‑1 (MQ=255)
                                       aaTGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCt                                                                                                         <  8:283429/149‑1 (MQ=255)
                                            ccTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCg                                                                                                    <  3:172350/149‑1 (MQ=255)
                                             cTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACAGGGAGTGATACGTTTCGAAGCAGTGCAGTCATGGCGCTGATGTCTTATTGACCCCCTTAACGGCCCCCGAGAGCCTGt                                                                                                       >  1:118627/1‑149 (MQ=255)
                                                gATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTg                                                                                                 <  7:302858/148‑1 (MQ=255)
                                                  tCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCa                                                                                              <  4:50802/149‑1 (MQ=255)
                                                      gTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGc                                                                                          >  3:193161/1‑149 (MQ=255)
                                                       tCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCt                                                                                         >  5:56660/1‑149 (MQ=255)
                                                       tCGAGGATCTTGCCGATTTCGGCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCt                                                                                         <  8:338604/149‑1 (MQ=255)
                                                         gAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTgg                                                                                       <  6:69664/149‑1 (MQ=255)
                                                                ttGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCATGCGCCTGTTCGCTGGc                                                                                               >  3:191930/1‑134 (MQ=255)
                                                                ttGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCATGCGCCTGTTCGCTGGc                                                                                               <  4:191930/134‑1 (MQ=255)
                                                                  gCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCAtgttgt                                                                               <  3:338193/148‑1 (MQ=255)
                                                                  gCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCAtgtt                                                                                 <  4:299270/146‑1 (MQ=255)
                                                                   ccGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGa                                                                             <  3:42867/149‑1 (MQ=255)
                                                                    ggATTTCGGCGGGGCTGCCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGaa                                                                            <  4:366385/148‑1 (MQ=255)
                                                                    cGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGaa                                                                            <  1:45290/149‑1 (MQ=255)
                                                                    cGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGa                                                                             >  6:58610/1‑148 (MQ=255)
                                                                    cGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGa                                                                             <  5:58610/148‑1 (MQ=255)
                                                                         tcgtcgGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCAt                                                                        <  7:130478/148‑1 (MQ=255)
                                                                           gtcgGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTg                                                                     >  2:26300/1‑149 (MQ=255)
                                                                           gtcgGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTg                                                                     >  7:232622/1‑149 (MQ=255)
                                                                             cgGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTgcg                                                                   <  7:284754/149‑1 (MQ=255)
                                                                                 gCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCTGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGt                                                               <  7:84521/149‑1 (MQ=255)
                                                                                     gCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCg                                                           >  1:57357/1‑149 (MQ=255)
                                                                                          cagcgtcgctgcggccatcaacgaactgggcgccgccacccaggaaatcgcccgcaacgcCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCgg                                                          >  8:137091‑M1/61‑149 (MQ=255)
                                                                                           aGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGAt                                                     <  5:182447/149‑1 (MQ=255)
                                                                                           aGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGAt                                                     <  1:290563/149‑1 (MQ=255)
                                                                                               tttCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTcc                                                 >  6:76546/1‑149 (MQ=255)
                                                                                                ttCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCt                                                >  2:85908/1‑149 (MQ=255)
                                                                                                              acgaactgggcgccgccacccaggaaatcgcccgcaacgcCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCt                                                                      <  6:102297‑M1/77‑1 (MQ=255)
                                                                                                              acgaactgggcgccgccacccaggaaatcgcccgcaacgcCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCt                                                                      >  5:102297‑M1/41‑117 (MQ=255)
                                                                                                                gACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAg                                >  3:182672/1‑149 (MQ=255)
                                                                                                                   tCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTc                             >  6:184834/1‑149 (MQ=255)
                                                                                                                   tCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTc                             >  6:367789/1‑149 (MQ=255)
                                                                                                                   tCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTc                             >  7:291625/1‑149 (MQ=255)
                                                                                                                     g‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGt                           <  6:56660/149‑1 (MQ=255)
                                                                                                                     g‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGt                           >  1:87947/1‑149 (MQ=255)
                                                                                                                        cTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGtt                          <  1:26300/149‑1 (MQ=255)
                                                                                                                           aTCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGAt                       >  5:382311/1‑149 (MQ=255)
                                                                                                                                ttGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGAt                       >  7:76843/1‑144 (MQ=255)
                                                                                                                                ttGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGAt                       <  8:76843/144‑1 (MQ=255)
                                                                                                                                          gggCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACg          >  7:203438/1‑149 (MQ=255)
                                                                                                                                            gCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGGTGATGGCCGCAGCGACGCt        >  8:179409/1‑149 (MQ=255)
                                                                                                                                              aGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGt      <  5:184834/149‑1 (MQ=255)
                                                                                                                                               gTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGtt     <  7:329250/149‑1 (MQ=255)
                                                                                                                                                tCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTg    <  5:76546/149‑1 (MQ=255)
                                                                                                                                                  aTGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGt  >  4:251110/1‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                
GATGGCGGCGTTCAGTGCCAGCAGGTTGGTCTGCTGAGAAATGCCCTTGATCACGTCGAGGATCTTGCCGATTTCGTCGGTGCTGGCGTTGAGCGTTTCGATCTGCGCGCACGACTCG‑‑CTGATCCGTTGCGA‑‑CAGGGCAGTCATGGCGCTGATGGCTTCTTCAACCACTTCACGGCCACCGTGCGCCTGTTCGCTGGCACCGCTGGCATGTTGTGAAGCATCTGCGGCGTTGCGGGCGATTTCCTGGGTGGCGGCGCCCAGTTCGTTGATGGCCGCAGCGACGCTGTTGGT  >  NC_002947/2565464‑2565754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.