| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2922971 | 46 (0.760) | 5 (0.090) | 5/248 | NT | 10.1% | coding (2282/2772 nt) | PP_2563 | antibiotic biosynthesis protein |
| ? | NC_002947 | = 2923001 | 46 (0.810) | coding (2252/2772 nt) | PP_2563 | antibiotic biosynthesis protein | |||||
GCAAGCGCCATCAGGTCCAACTCGCCAACCACCAGCACGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2922821‑2922971‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctggATGTGCTCCTCAACCAGTTCGTATTCGACGCCAGCGCCCTGCTCAACCGGGTGCCCCAGCACTTCCTGGCGGTGATGGTACTGGGCATGGCCGTGCACCATGCCGACACGATCTCACGCAAATGGGTGGCCAGTGCAGTGGCCGTGC < NC_002947/2923001‑2922855 GCAAGCGCCATCAGGTCCAACTCGCCAACCACCAGCACGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCT > 1:246339/1‑149GCAAGCGCCATCAGGTCCAACTCGCCAACCACCAGCACGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTATCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCT > 5:206117/1‑149 CAAGCGCCATCAGGTCCAACTCGCCAACCACCAGCACGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTG < 2:195925/149‑1 GCACGGCCACTGCACTGGCCACCCATTTGCGTCAGATCGTGTCGGCATGGAGCACGGCCATGCCCAGTACCATAACCGCCAGGAACTGCAGGGGCACCCGGTAGAGCAGCGCGCTGCATGAGCTCCTCAACCAGATCGTATACGACGC > 6:206512/1‑148 cctCTGCACTGGCCACCCATTTGCGTGAGATCGTGTGGGCATGGTGCACGGCCATGCCCAGTACCATCACCTCCAGTAAGTGCTGGGGCAACCGGTTGAGCAGGGCGCTGGATGTGCTCCTCTACCAGTTCGTATTCGACGCCAGCGCC < 5:206512/146‑1 CACTGCACTGGCCACCCATTTGCGTGAGAGCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGATGTGCTCCTCAACCAGTTCGTATTCGACGCCAGCGCCC < 7:156141/149‑1 TGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGATGTGCTCCTCAACCAGTTCGTATTCGGCGCCAGCGCCCT < 3:357998/147‑1 TGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGATGTGCTCCTCAACCAGTTCGTATTCGGCGCCAGCGCCCT > 4:357998/1‑147 GCGCTGGATGTGCTCCTCAACCAGTTCGTATTCGACGCCAGCGCCCTGCTCAACCGGGTGCCCCAGCACTTCCTGGCGGTGATGGTACTGGGCATGGCCGTGCACCATGCCGACACGATCTCACGCAAATGGGTGGCCAGTGCAGTGG < 6:132773/148‑1 GCTGGATGTGCTCCTCAACCAGTTCGTATTCGACGCCAGCGCCCTGCTCAACCGGGTGCCCCAGCACTTCCTGGCGGTGATGGTACTGGGCATGGCCGTGCACCATGCCGACACGATCTCACGCAAATGGGTGGCCAGTGCAGTGGCCG > 7:46106/1‑149 GGATGTGCTCCTCAACCAGTTCGTATTCGACGCCAGCGCCCTGCTCAACCGGGTGCCCCAGCACTTCCTGGCGGTGATGGTACTGGGCATGGCCGTGCACCATGCCGACACGATCTCACGCAAATGGGTGGCCAGTGCAGTGGCCGTGC > 7:72449/1‑149 GCAAGCGCCATCAGGTCCAACTCGCCAACCACCAGCACGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2922821‑2922971‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctggATGTGCTCCTCAACCAGTTCGTATTCGACGCCAGCGCCCTGCTCAACCGGGTGCCCCAGCACTTCCTGGCGGTGATGGTACTGGGCATGGCCGTGCACCATGCCGACACGATCTCACGCAAATGGGTGGCCAGTGCAGTGGCCGTGC < NC_002947/2923001‑2922855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |