New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2922971	46 (0.760)	5 (0.090)	5/248	NT	10.1%	coding (2282/2772 nt)	PP_2563	antibiotic biosynthesis protein
	?	NC_002947	= 2923001	46 (0.810)					coding (2252/2772 nt)	PP_2563	antibiotic biosynthesis protein

CAGCACGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATGTACCAATAGTTGAACAG  >  NC_002947/2922853‑2923146                                                                                                                                                     |                                                                                                                                                  caGCACGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACAt                                                                                                                                                   >  8:72449/1‑149 (MQ=255)   gCACGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATcc                                                                                                                                                 >  7:72449‑M2/1‑147 (MQ=255)      cGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATccagc                                                                                                                                              >  7:46106‑M2/1‑144 (MQ=255)         ccACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATccagcgc                                                                                                                                            <  6:132773‑M2/148‑8 (MQ=255)           actgcactgGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGccac                                                                                                                                         >  7:182694/1‑149 (MQ=255)               cactgGCCACCAATTTGCGTGAGATCGTGTCGGCATGTTGCACGGCCATGCCAAGTACCATAACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTTAGGAGCACCTCCAGATCCACCAGt                                                                                                                                     >  2:321988/1‑149 (MQ=255)                    gCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCACTGca                                                                                                                                  >  2:117362/1‑147 (MQ=255)                      cACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAgg                                                                                                                              >  6:114991/1‑149 (MQ=255)                         ccATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAg                                                                                                                           <  4:142062/149‑1 (MQ=255)                                cGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCgatgat                                                                                                                    >  2:295019/1‑149 (MQ=255)                                cGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCgatgat                                                                                                                    <  5:169707/149‑1 (MQ=255)                                  tGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATca                                                                                                                  <  5:114991/149‑1 (MQ=255)                                   gagaTCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATcag                                                                                                                 >  7:241356/1‑149 (MQ=255)                                          tgtCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGa                                                                                                          <  7:261095/149‑1 (MQ=255)                                              ggCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAAc                                                                                                       <  5:209076/148‑1 (MQ=255)                                               gCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACgg                                                                                                     >  1:328253/1‑149 (MQ=255)                                               gCAGGGGGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGGGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACgg                                                                                                     <  8:241356/149‑1 (MQ=255)                                                cATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACggg                                                                                                    >  2:72897/1‑149 (MQ=255)                                                  tGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTc                                                                                                  <  7:133007/149‑1 (MQ=255)                                                      gCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGc                                                                                               >  5:327087/1‑148 (MQ=255)                                                             cATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAAt                                                                                            <  1:218468/144‑1 (MQ=255)                                                             cATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAAt                                                                                            >  2:218468/1‑144 (MQ=255)                                                             cATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCa                                                                                       <  6:206117/149‑1 (MQ=255)                                                             cATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCa                                                                                       <  2:246339/149‑1 (MQ=255)                                                                 cccAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAACCGGGTCGGCAATCAGCACCTg                                                                                   <  5:132773/149‑1 (MQ=255)                                                                   cAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGgc                                                                                 >  2:33135/1‑149 (MQ=255)                                                                        ccATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCAcg                                                                            <  5:256906/149‑1 (MQ=255)                                                                                     gAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACa                                                               <  2:328253/149‑1 (MQ=255)                                                                                           cTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCa                                                         <  1:72897/149‑1 (MQ=255)                                                                                           cTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCa                                                         <  1:295019/149‑1 (MQ=255)                                                                                                  aCCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAAt                                                  >  4:56098/1‑149 (MQ=255)                                                                                                   cccGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATg                                                 <  8:182694/149‑1 (MQ=255)                                                                                                    ccGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGa                                                >  8:74600/1‑149 (MQ=255)                                                                                                        ttGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCAc                                            <  1:367465/149‑1 (MQ=255)                                                                                                           aGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTc                                                                                                  <  4:39989/92‑1 (MQ=255)                                                                                                           aGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTc                                                                                                  >  3:39989/1‑92 (MQ=255)                                                                                                           aGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGAc                                                                <  8:216556/126‑1 (MQ=255)                                                                                                           aGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGAc                                                                >  7:216556/1‑126 (MQ=255)                                                                                                           aGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGat                                         >  3:37635/1‑149 (MQ=255)                                                                                                              aGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGatcat                                      >  3:177489/1‑149 (MQ=255)                                                                                                              aGGGCGCTGGCGCCGAATACGAACTGGTTGAGGAGCACATccagcgccctgctcaaccgggtgccccagcacttcctggcggtgatggtactgggcatggccgtgcaccatgccgacacgatctcacgcaaatgggtggccagtgca                                        >  4:357998‑M2/1‑40 (MQ=255)                                                                                                              aGGGCGCTGGCGCCGAATACGAACTGGTTGAGGAGCACATccagcgccctgctcaaccgggtgccccagcacttcctggcggtgatggtactgggcatggccgtgcaccatgccgacacgatctcacgcaaatgggtggccagtgca                                        <  3:357998‑M2/147‑108 (MQ=255)                                                                                                               gggCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATccagcgccctgctcaaccgggtgccccagcacttcctggcggtgatggtactgggcatggccgtgcaccatgccgacacgctctcacgcaaatgggtggccagtgcagtg                                     <  7:156141‑M2/149‑111 (MQ=255)                                                                                                                ggCGCTGGCGTCGAATACGAACTGGTAGAGGAGCACATccagcgccctgctcaaccggttgccccagcacttactggaggtgatggtactgggcatggccgtgcaccatgcccacacgatctcacgcaaatgggtggccagtgcagagg                                    <  5:206512‑M2/149‑112 (MQ=255)                                                                                                                      ggCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCAcc                               >  5:216854/1‑148 (MQ=255)                                                                                                                       gCGTCGTATACGATCTGGTTGAGGAGCTCATgcagcgcgctgctctaccgggtgcccctgcagttcctggcggttatggtactgggcatggccgtgctccatgccgacacgatctgacgcaaatgggtggccagtgcagtggccgtgc                              >  6:206512‑M2/1‑31 (MQ=255)                                                                                                                          tCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAacac                          >  2:102437/1‑149 (MQ=255)                                                                                                                          tCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAacac                          <  6:327087/149‑1 (MQ=255)                                                                                                                                  gAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATg                   >  4:190211/1‑148 (MQ=255)                                                                                                                                  gAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATg                   >  6:329385/1‑148 (MQ=255)                                                                                                                                  gAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATg                   >  3:298519/1‑148 (MQ=255)                                                                                                                                    aCTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATGTAc                <  6:108999/149‑1 (MQ=255)                                                                                                                                       ggTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGCTCGACAGCACCAGGCCAATGATCACGATCATCGGCACGCACACGTCGAGGTCCCaa             >  8:170178/1‑149 (MQ=255)                                                                                                                                         ttGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGTGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATGTACCAATa           <  1:117362/149‑1 (MQ=255)                                                                                                                                              gagCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATGTACCAATAGTTGa      <  4:298519/149‑1 (MQ=255)                                                                                                                                              gagCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCAGCTGCACCAACACTTCCATGTACCAATAGTTg       >  7:228056/1‑148 (MQ=255)                                                                                                                                                  acaTCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATGTACCAATAGTTGAACAg  <  7:170178/149‑1 (MQ=255)                                                                                                                                                   caTCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATGTACCAATAGTTGAACAg  >  7:11812/1‑148 (MQ=255)                                                                                                                                                     |                                                                                                                                                  CAGCACGGCCACTGCACTGGCCACCCATTTGCGTGAGATCGTGTCGGCATGGTGCACGGCCATGCCCAGTACCATCACCGCCAGGAAGTGCTGGGGCACCCGGTTGAGCAGGGCGCTGGCGTCGAATACGAACTGGTTGAGGAGCACATCCAGCGCCACCAGTGCACAGGCAGCGATGATCAGCCAGCGAAACGGGTCGGCAATCAGCACCTGGCGCACGCGCCTGATCGACAGCACCAGGCCAATGATCACGATCATCTGCACCAACACTTCGATGTACCAATAGTTGAACAG  >  NC_002947/2922853‑2923146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.