New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3075535 =	58 (0.960)	3 (0.050)	3/254	NT	5.4%	coding (518/723 nt)	PP_2685	hypothetical protein
	?	NC_002947	3075568 =	50 (0.860)					coding (485/723 nt)	PP_2685	hypothetical protein

CTGGATTACCGCACGCCGCTTGATGAAGCGCTGCGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3075575‑3075535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggTAATCCAGGTTGCGGTCGAGTATTGGCCTGCCGTACTTGCTTTCACCCAGCTGCAGAAACGGGGTGTCCGGTGTGGCCTGGAAGAAATTGCCTTGTGCATACACGTTGTAGATGGCCATGGGGCCGCCGGCTATCTGGCCGCC  >  NC_002947/3075568‑3075710                                                                                                                                                                                          CTGGATTACCGCACGCCGCTTGATGAAGCGCTGCGCTGCGGTAATCCAGGTTGCGGTCGAGTATTGGCCTGCCGTACTTGCTTTCACCCAGCTGCAGAAACGGGGTGTCCGGTGTGGCCTGGAAGAAATTGCCTTGTGCATACACGTTG                                     >  7:215218/1‑149     ATTACCGCACGCCGCTTGATGAAGCGCTGCGCTGCGGTAATCCAGGTTGCGGTCGAGTATTGGCCTGCCGTACTTGCTTTCACCCAGCTGCAGAAACGGGGTGTCCGGTGTGGCCTGGAAGAAATTGCCTTGT                                                 >  3:287142/1‑133     ATTACCGCACGCCGCTTGATGAAGCGCTGCGCTGCGGTAATCCAGGTTGCGGTCGAGTATTGGCCTGCCGTACTTGCTTTCACCCAGCTGCAGAAACGGGGTGTCCGGTGTGGCCTGGAAGAAATTGCCTTGT                                                 <  4:287142/133‑1                                     TGCGGTAATCCAGGTTGCGGTCGAGTATTGGCCTGCCGTACTTGCTTTCACCCAGCTGCAGAAACGGGGTGTCCGGTGTGGCCTGGAAGAAATTGCCTTGTGCATACACGTTGTAGATGGCCATGGGGCCGCCGGCTATCTGGCCGCC  >  6:158504/1‑148                                                                                                                                                                                          CTGGATTACCGCACGCCGCTTGATGAAGCGCTGCGCTGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3075575‑3075535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcggTAATCCAGGTTGCGGTCGAGTATTGGCCTGCCGTACTTGCTTTCACCCAGCTGCAGAAACGGGGTGTCCGGTGTGGCCTGGAAGAAATTGCCTTGTGCATACACGTTGTAGATGGCCATGGGGCCGCCGGCTATCTGGCCGCC  >  NC_002947/3075568‑3075710

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.