| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3290190 = | 47 (0.780) | 5 (0.090) | 3/254 | NT | 10.3% | coding (1222/1752 nt) | PP_2892 | hypothetical protein |
| ? | NC_002947 | 3290226 = | 42 (0.730) | coding (1258/1752 nt) | PP_2892 | hypothetical protein | |||||
AAACTGTACGCGTCCGAGAAAGCGGTGGTTGTGGCCGAGTGTGGTCAGGCCTTTGAGCAATACGTTGCCGTGCAGCAGGTTGGTGTCGGACACCAGCCCTTCCTTGGCACCTTGAACATCGAACTGCAGGCGATAGCCGTTGTGCGGATCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3290342‑3290190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGACCACACTCGGCCACAACCACCGCTTTCTCGGACGCGTACAGTTTGGTGGCAGTGCAACCAATGGCTTCAAGAA > NC_002947/3290226‑3290371 AAACTGTACGCGTCCGAGAAAGCGGTGGTTGTGGCCGAGGGTGGTCAGGCCTTTGAGCAATACGTTGCCGTGCAGCAGGTTGGTGTCGGACACCAGCCCTTCCTTGGCACCTTGAACATCGAACTGCAGGCGATAGCCGTTGTGCGGAT < 7:318977/149‑1 TACGCGTCCGAGAAAGCGGTGGTTGTGGCCGAGTGTGGTCAGGCCTTTGATCAATACGTTGCCGTGCAGCAGGTTGGTGTCGGACACCAGCCCTTCCTTGGCACCTTGAACATCGAACTGCAGGCGATAGCCGTTGTGCGGATCGAT < 7:170626/147‑1 CCTTGAACATCGAACTGCAGGCGATAGCCGTTGTGCGGATCGATGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGACCACACTCGGCCACAACCACCGCTTTCTCGGA > 4:255347/1‑149 CCTTGAACATCGAACTGCAGGCGATAGCCGTTGTGCGGATCGATGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGACCACACTCGGCCACAACCACCGCTTTCTCGGA > 8:316184/1‑149 CCTTGAACATCGAACTGCAGGCGATAGCCGTTGTGCGGATCGATGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGA < 1:180231/117‑1 CCTTGAACATCGAACTGCAGGCGATAGCCGTTGTGCGGATCGATGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGA > 2:180231/1‑117 AACATCGAACTGCAGGCGATAGCCGTTGTGCGGATCGATGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGACCACACTCGGCCACAACCACCGCTTTCTCGGACGCcc > 4:176493/1‑147 GATGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGACCACACTCGGCCACAACCACCGCTTTCTCGGACGCGTACAGTTTGGTGGCAGTGCAACCAATGGCTTCAAGAA < 2:55728/149‑1 GATGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGACCACACTCGGCCACAACCACCGCTTTCTCGGACGCGTACAGTTTGGTGGCAGTGCAACCAATGGCTTCAAGAA < 3:255347/149‑1 GATGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGACCACACTCGGCCACAACCACCGCTTTCTCGGACGCGTACAGTTTGGTGGCAGTGCAACCAATGGCTTCAAGAA < 7:316184/149‑1 ATGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGACCACACTCGGCCACAACCACCGCTTTCTCGGACGCGTACAGTTTGGTGGCAGTGCAACCAATGGCTTCAAGAA > 3:284176/1‑148 AAACTGTACGCGTCCGAGAAAGCGGTGGTTGTGGCCGAGTGTGGTCAGGCCTTTGAGCAATACGTTGCCGTGCAGCAGGTTGGTGTCGGACACCAGCCCTTCCTTGGCACCTTGAACATCGAACTGCAGGCGATAGCCGTTGTGCGGATCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3290342‑3290190‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgatGTTCAAGGTGCCAAGGAAGGGCTGGTGTCCGACACCAACCTGCTGCACGGCAACGTATTGCTCAAAGGCCTGACCACACTCGGCCACAACCACCGCTTTCTCGGACGCGTACAGTTTGGTGGCAGTGCAACCAATGGCTTCAAGAA > NC_002947/3290226‑3290371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |