New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3383566	54 (0.900)	54 (0.900)	47/262	NT	66.8%	coding (500/546 nt)	PP_2985	hypothetical protein
	?	NC_002947	= 4962737	0 (0.000)					coding (918/1218 nt)	fleS	two‑component system sensor histidine kinase FleS

TCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3383419‑3383566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACCGTTCCTTACCAC  <  NC_002947/4962737‑4962591                                                                                                                                                                                                                                                                                                          TCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCA                                                                                                                                                      >  5:173880/1‑148 TCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCA                                                                                                                                                      >  4:17157/1‑148     ATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑G                                                                                                                                                >  7:20782/1‑149        GATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCC                                                                                                                                             <  8:20782/149‑1             AACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTATAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAG                                                                                                                                        <  4:61169/149‑1                    CTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGC                                                                                                                                  <  6:325372/148‑1                     TCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCATCGc                                                                                                                                >  6:255306/1‑148                       AATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATG                                                                                                                              >  2:224344/1‑149                          GGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGC                                                                                                                            <  7:239889/148‑1                          GGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGC                                                                                                                            >  8:239889/1‑148                               GCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCATCGCTGGCCtgcag                                                                                                                      <  5:255306/149‑6                               GCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCATCGCTGGCCtgcag                                                                                                                      <  2:221734/149‑6                               GCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGC                                                                                                                       <  8:30353/148‑1                                CTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATATCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGC                                                                                                                     >  5:212045/1‑149                                  GAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGG                                                                                                                   >  3:338328/1‑149                                  GAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGG                                                                                                                   >  5:154051/1‑149                                   AAGCGCGTGGGCGCGAAGCAGTCGTTGCTGAGCAGGGCTTCTAAGCTACTCGTTTAAATAGAATAGGTTAGAGAAGGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCGGAAATT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGG                                                                                                                   <  8:275858/148‑1                                   AAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAATCGCCCTGCAGGCCAGCGATGGCCCGGCGCG                                                                                                                    <  1:220938/148‑1                                        ATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAG                                                                                                             <  2:356468/149‑1                                         TTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGG                                                                                                            >  2:44035/1‑149                                               GCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACC                                                                                                      >  4:322165/1‑149                                                 GAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGTCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTG                                                                                                    <  5:29344/149‑1                                                        TCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCC                                                                                             <  8:150319/149‑1                                                          TTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGC                                                                                           >  6:280949/1‑149                                                            TGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCG                                                                                            <  6:154051/146‑1                                                              CTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAAC                                                                                       >  4:299795/1‑149                                                                    AGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACAGCCGCGAACGTAGCT                                                                                 >  3:149309/1‑149                                                                            TAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTG                                                                         >  5:247688/1‑149                                                                              ATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTG                                                                       >  1:238349/1‑149                                                                              ATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCT                                                                          <  4:338328/146‑1                                                                                CTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCG                                                                     >  4:211769/1‑149                                                                                      GTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGC                                                                >  3:6559/1‑148                                                                                       TTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGA                                                              <  3:322165/149‑1                                                                                           AATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCC                                                          >  6:258500/1‑149                                                                                                  TAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGACCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTG                                                   >  5:91784/1‑149                                                                                                          AGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAAC                                                                                       >  4:312783/1‑105                                                                                                            AACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATG                                          >  4:181209/1‑148                                                                                                             ACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCA                                        <  3:299795/149‑1                                                                                                              CGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAG                                       <  6:247688/149‑1                                                                                                              CGAATCTCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAG                                       <  6:212045/149‑1                                                                                                                    TCCTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGC                                 >  6:369796/1‑149                                                                                                                      CTAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTC                               >  4:145290/1‑149                                                                                                                       TAATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCG                              >  5:328311/1‑149                                                                                                                       TAATTTTTGACTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCG                              >  2:336839/1‑149                                                                                                                        AATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGG                             <  3:17157/149‑1                                                                                                                         ATTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGT                            <  1:224344/149‑1                                                                                                                          TTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTC                           >  7:91704/1‑149                                                                                                                          TTTTTGCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACAGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTC                           <  4:149309/149‑1                                                                                                                               GCCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTT                       <  5:258500/148‑1                                                                                                                                CCTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGG                     >  5:247008/1‑149                                                                                                                                 CTTATCTCGTCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGG                    <  5:271093/149‑1                                                                                                                                 CTTATCTCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGG                    <  4:6559/149‑1                                                                                                                                       TCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACC              >  3:318739/1‑149                                                                                                                                       TCGGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACC              >  1:7658/1‑149                                                                                                                                         GGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGACCCGT            >  5:192293/1‑149                                                                                                                                         GGCATGACCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACCGT            <  5:280949/149‑1                                                                                                                                          GCATGACCCCAACAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACCGTT           <  3:200278/149‑1                                                                                                                                                CCCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACCGTTCCTTA      <  3:181209/148‑1                                                                                                                                                 CCCAAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACCGTTCCTTAC     >  3:94282/1‑148                                                                                                                                                    AAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACCGTTCCTTACCAC  >  1:81730/1‑148                                                                                                                                                    AAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACCGTTCCTTACCAC  >  8:39257/1‑148                                                                                                                                                                                                                                                                                                          TCGCATAGATCAAACCTTCCTCAATGGATGGCTGAAGCGATTGGGCGCGAAGCAGTCTTTGCTGAGCAGGGCTTCTAATCTACTCGTTTAAATACAATAGCTTAGAGAACGAATGTCCTAATTTTTGCCTTATCTCGGCATGACCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3383419‑3383566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAAAT‑GCCCTGCAGGCCAGCGATGGCCCGGCGCGGCTGAAGGTGCACCTGTACCGCCGCGAACGTAGCTTGCACCTGTGCGTCAGCGATGCCGGCAGTGGCATCGATGCAGGCTTGCTCGGTCGTTTGGGCGAACCGTTCCTTACCAC  <  NC_002947/4962737‑4962591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.