| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3383566 | 54 (0.900) | 54 (0.900) | 47/262 | NT | 66.8% | coding (500/546 nt) | PP_2985 | hypothetical protein |
| ? | NC_002947 | = 4962737 | 0 (0.000) | coding (918/1218 nt) | fleS | two‑component system sensor histidine kinase FleS | |||||
Only 100 of 134 total aligned reads displayed.
GTGGTAAGGAACGGTTCGCCCAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGGCCGCCTGTTGCAGGGCCTGGAACAGCGCTTTCGGG > NC_002947/4962591‑4962881 | gtggtAAGGAACGGTTCGCCCAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTt > 8:39257‑M2/1‑147 (MQ=255)gtggtAAGGAACGGTTCGCCCAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTt > 1:81730‑M2/1‑147 (MQ=255)atcccccaagcgaggcaaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgacttatctcggaataaccccAttt > 3:49923‑M2/145‑148 (MQ=255) gtAAGGAACGGTTCGCCCAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggg > 3:94282‑M2/1‑144 (MQ=255) tAAGGAACGGTTCGCCCAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtgggg < 3:181209‑M2/148‑6 (MQ=255) cccaagcgaggcaaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAAt > 4:285815‑M2/141‑149 (MQ=255) caagcgaggcaaaagcatcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCa < 6:253266‑M2/11‑1 (MQ=255) aagcgaggcaaaagcatcagcatagacggctagccagacggtggatgaccagcaagacacggcctctcgaataaccttttaaatcaaatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAg > 8:204085‑M2/138‑149 (MQ=255) aCGGTTCGCCCAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgcc < 5:280949‑M2/149‑13 (MQ=255) aCGGGTCGCCCAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgcc > 5:192293‑M2/1‑137 (MQ=255) ggTTCGCCCAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccga > 3:318739‑M2/1‑135 (MQ=255) aaaagcatcagcatagacggctagccagacggtggataaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGc > 1:66803‑M2/129‑147 (MQ=255) cccAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgacgagataag < 5:271093‑M2/149‑21 (MQ=255) ccAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataagg > 5:247008‑M2/1‑128 (MQ=255) atcagcatagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGcc > 3:158153‑M2/123‑149 (MQ=255) gACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCTGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaa < 4:149309‑M2/149‑28 (MQ=255) gACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaa > 7:91704‑M2/1‑122 (MQ=255) aCCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaat < 1:224344‑M2/149‑29 (MQ=255) ccGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaatt < 3:17157‑M2/149‑30 (MQ=255) cGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataagtcaaaaatta > 2:336839‑M2/1‑119 (MQ=255) cGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaatta > 5:328311‑M2/1‑119 (MQ=255) tagacggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAgg < 2:10481‑M2/34‑1 (MQ=255) gAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattag > 4:145290‑M2/1‑118 (MQ=255) ggctagccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTc > 2:277312‑M2/111‑149 (MQ=255) cTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggagattcg < 6:212045‑M2/149‑40 (MQ=255) cgagtcggtggatgaccagcaagccacggcctctcgaataaccttttaaaacaaatatttacacaacgaatgtcctaatttttgccttatctcggcataaccccATTTTGAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGtt < 5:288947‑M2/45‑1 (MQ=255) ccagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGtt < 4:49923‑M2/45‑1 (MQ=255) cATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgtt > 4:181209‑M2/1‑107 (MQ=255) cagacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTg < 6:292857‑M2/46‑1 (MQ=255) agacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGc < 1:12476‑M2/47‑1 (MQ=255) gacggtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGca > 6:32920‑M2/102‑149 (MQ=255) gtggatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgcattatctcggcataaccccATTTTCAATAAGGTTG‑AGCAAGGCTCCGCCCAGGGTGTCGCGGTTGCAcag > 7:179477‑M2/98‑148 (MQ=255) gatgaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCAcagcag < 7:219561‑M2/54‑1 (MQ=255) gaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAgg > 6:206060‑M2/92‑104 (MQ=255) gaccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAgg < 5:206060‑M2/13‑1 (MQ=255) ccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCAcc < 5:30579‑M2/60‑1 (MQ=255) ccagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCAcc > 2:168256‑M2/90‑149 (MQ=255) ggCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatt > 6:258500‑M2/1‑91 (MQ=255) cagcaagccacggcctctcgaataaccttttaaatcatatatttacggaacgaatgtcctaattttttccttatctcggcataaccccATTTTCAATCAGGTTGCAGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCAcc < 1:268558‑M2/61‑1 (MQ=255) cagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCAccc < 3:285815‑M2/61‑1 (MQ=255) cagcaagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCAcc > 2:210762‑M2/89‑148 (MQ=255) cgatctccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCa < 7:48083‑M2/62‑1 (MQ=255) caagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGa < 8:329512‑M2/64‑1 (MQ=255) caagccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGa < 2:66803‑M2/64‑1 (MQ=255) tCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaa < 3:322165‑M2/149‑63 (MQ=255) gccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACGCAGATGa < 7:204085‑M2/67‑1 (MQ=255) gccacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGa < 3:10217‑M2/67‑1 (MQ=255) gCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaac > 3:6559‑M2/1‑85 (MQ=255) cacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGtt < 3:170467‑M2/15‑1 (MQ=255) cacggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGtt > 4:170467‑M2/81‑95 (MQ=255) cggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGt < 7:63182‑M2/71‑1 (MQ=255) ggcctctcgaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTc > 8:202868‑M2/78‑149 (MQ=255) cGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtag > 4:211769‑M2/1‑80 (MQ=255) cacaGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagat > 1:238349‑M2/1‑78 (MQ=255) caGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagatta > 5:247688‑M2/1‑76 (MQ=255) aGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagat < 4:338328‑M2/146‑72 (MQ=255) gaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGc > 7:159866‑M2/70‑148 (MQ=255) gaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGc > 5:110117‑M2/70‑148 (MQ=255) gaataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccacATTTTCAATCAGGTTG‑AGCAAGGAGCAGACAAGGGTGTCGCGGTTGCAAAGCAGCTCACCCAGATGACTTTCGCACTGc > 7:154997‑M2/70‑148 (MQ=255) aataaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCa < 1:175700‑M2/81‑1 (MQ=255) taaccttttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAgc < 1:277312‑M2/83‑1 (MQ=255) aGCTACGTTCGCGGCTGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccct > 3:149309‑M2/1‑68 (MQ=255) ttaaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGc > 8:294316‑M2/60‑149 (MQ=255) gTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcag > 4:299795‑M2/1‑62 (MQ=255) taaatcatatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGc < 8:172604‑M2/90‑1 (MQ=255) cggcggTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagca < 6:154051‑M2/146‑90 (MQ=255) catatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGc > 4:351525‑M2/54‑147 (MQ=255) catatatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGc < 3:351525‑M2/94‑1 (MQ=255) atatttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGAACTGCCAGCGCACGGCGTGCCCCTg > 7:248066‑M2/51‑149 (MQ=255) tttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGcac < 2:248161‑M2/102‑1 (MQ=255) tttacagaacgaatgtcctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGca < 1:168256‑M2/101‑1 (MQ=255) cAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgacgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttc < 5:29344‑M2/149‑101 (MQ=255) ggTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgc > 4:322165‑M2/1‑47 (MQ=255) gcacgaatgtgctactttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGAAAGGCGCGGACCAGTGTGTCGCGGTTGCACAGCTGCTCACCCAGATGTCTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATgcgc < 8:248066‑M2/108‑1 (MQ=255) ccTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaa > 2:44035‑M2/1‑41 (MQ=255) ccGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttc > 3:338328‑M2/1‑34 (MQ=255) ccGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttc > 5:154051‑M2/1‑34 (MQ=255) ccGCGCCGGGCCATCGCTGGCCTGCAGGGC‑AATTtccggtcatgccgagataaggcaaaaattaggacattccttctctaacctattctatttaaacgagtagcttagaagccctgctcagcaacgactgcttcgcgcccacgcgctt < 8:275858‑M2/148‑115 (MQ=255) ctaatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGgc < 7:18590‑M2/114‑1 (MQ=255) cgcgCCGGGCCATCGCTGGCCTGCAGGGCGATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgctt < 1:220938‑M2/148‑115 (MQ=255) taatttttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCATGCACATGAGCATGGGCCGCCTg > 6:130641‑M2/30‑149 (MQ=255) gcgcCGGGCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggatattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcag > 5:212045‑M2/1‑32 (MQ=255) ctgcaggccagcGATGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagc < 5:255306‑M2/144‑119 (MQ=255) ctgcaggccagcGATGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagc < 2:221734‑M2/144‑119 (MQ=255) ttgccttatctcggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGGCCGCCTGTTGCa < 7:202868‑M2/125‑1 (MQ=255) gCCATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatcc < 7:239889‑M2/148‑124 (MQ=255) cATCGCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccatt > 2:224344‑M2/1‑23 (MQ=255) gcgATGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccattga > 6:255306‑M2/2‑21 (MQ=255) tttctcggcgtaacccgATGTTGACTCAGGTTG‑GGCAAGGGGCCGACCAGGGTGTCGCGGTTGGACAGCAGCTCACCCAGATGACTGTCGGACGGCCCGCGCGCGGCGTGCCCCTGCACATGCGCCTGGGCCGCCGGTTGCGGGGCCTg > 2:85582‑M2/18‑149 (MQ=255) gCTGGCCTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccattgag < 6:325372‑M2/148‑130 (MQ=255) ggcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGGCCGCCTGTTGCAGGGCCTGGaa < 4:72440‑M2/135‑1 (MQ=255) gcataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGGCCGCCTGTTGCAGGGCCTGGAACAgc > 3:246755‑M2/11‑149 (MQ=255) cTGCAGGGC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttatacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccattgaggaaggtt < 4:61169‑M2/149‑137 (MQ=255) cataaccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGccc > 6:213066‑M2/10‑105 (MQ=255) gggC‑ATTTtggggtcatgccgagataaggcaaaaattaggacattcgttctctaagctattgtatttaaacgagtagattagaagccctgctcagcaaagactgcttcgcgcccaatcgcttcagccatccattgaggaaggtttgatc < 8:20782‑M2/149‑142 (MQ=255) accccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGGCCGCCTGTTGCAGGGCCTGGAACAGCGCttt < 6:110117‑M2/144‑1 (MQ=255) accccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGGCCGCCTGTTGCAGGGCCTGGAACAGCGCttt < 8:159866‑M2/144‑1 (MQ=255) accccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGGCCGCCTGTTGCAGGGCCTGGAACAGCGCttt < 8:154997‑M2/144‑1 (MQ=255) ccccATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGcac < 3:209011‑M2/102‑1 (MQ=255) cATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAAGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGGCCGCCTGTTGCAGGGCCTGGAACAGCGCTTTCggg < 4:165105‑M2/148‑1 (MQ=255) | GTGGTAAGGAACGGTTCGCCCAAACGACCGAGCAAGCCTGCATCGATGCCACTGCCGGCATCGCTGACGCACAGGTGCAAGCTACGTTCGCGGCGGTACAGGTGCACCTTCAGCCGCGCCGGGCCATCGCTGGCCTGCAGGGC‑ATTTTCAATCAGGTTG‑AGCAAGGCGCCGACCAGGGTGTCGCGGTTGCACAGCAGCTCACCCAGATGACTGTCGCACTGCCAGCGCACGGCGTGCCCCTGCACATGCGCCTGGGCCGCCTGTTGCAGGGCCTGGAACAGCGCTTTCGGG > NC_002947/4962591‑4962881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |