| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3497012 = | 57 (0.950) | 3 (0.050) | 3/252 | NT | 5.1% | coding (585/765 nt) | PP_5562 | hypothetical protein |
| ? | NC_002947 | 3497088 = | 57 (0.990) | coding (509/765 nt) | PP_5562 | hypothetical protein | |||||
AAAGACCCCAACCGCAGCAGCGCCGAGCTGTACCGCTTCGTGGTGCACTACCTGGTGCTGTTCTACTGCCTGAGCAAGTCGCCTGGCCTTGGGCGGCTGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3497164‑3497012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgacTTGCTCAGGCAGTAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGATGC > NC_002947/3497088‑3497235 AAAGACCCCAACCGCAGCAGCGCCGAGCTGTACCGCTTCGTGGTGCACTACCTTGTGCTGTTCTACTGCCTGAGCAAGTCGCCTGGCCTTGGGCGGCTGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTG < 3:282702/148‑1AAAGACCCCAACCGCAGCAGCGCCGAGCTGTACCGCTTCGTGGTGCACTACCTGGTGCTGTTCTACTGCCTGAGCAAGTCGCCTGGCCTTGGGCGGCTGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTGG < 2:212146/149‑1 AGACCCCAACCGCAGCAGCGCCGAGCTGTACCGCTTCGTGGTGCACTACCTGGTGCTGTTCTACTGCCTGAGCAAGTCGCCTGGCCTTGGGCGGCTGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTGGCG < 6:81384/149‑1 ACCCCAACCGCAGCAGCGCCGAGCTGTACCGCTTCGTGGTGCACTACCTGGTGCTGTTCTACTGCCTGAGCAAGTCGCCTGGCCTTGGGCGGCTGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTGGCGAC < 3:266642/149‑1 TGAGCAAGTCGCCTGGCCTTGGGCGGCTGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTGGCGACTTGCTCAGGCAGTAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCGGCTGCGG > 2:292331/1‑149 GAGCAAGTCGCCTGGCCTTGGGCGGCTGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTGGCGACTTGCTCAGGCAGTAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGT > 6:382825/1‑149 AAGTCGCCTGGCCTTGGGCGGCTGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTGGCGACTTGCTCAGGCAGTAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGG < 5:382825/149‑1 CGACTTGCTCAGGCAGTAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGA < 4:267827/149‑1 GACTTGCTCAGGCAGTAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGAT < 6:367850/149‑1 ACTTGCTCAGGCAGTAGACCAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTtccacgc < 3:30736/149‑8 CTTGCGCAGGCCGTAGAACAGCACCAGGTAGCGCACCACGACGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAACCCGCGCCAGGTCGAAGGCGGGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGATGC < 3:219241/149‑1 AAAGACCCCAACCGCAGCAGCGCCGAGCTGTACCGCTTCGTGGTGCACTACCTGGTGCTGTTCTACTGCCTGAGCAAGTCGCCTGGCCTTGGGCGGCTGTTCGAGGGCCTGCGCTACGGCCTGAGCTTCGAGCGCCTGAAGGGCTTTGGCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3497164‑3497012‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgacTTGCTCAGGCAGTAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGATGC > NC_002947/3497088‑3497235 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |