New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3497012 =	57 (0.950)	3 (0.050)	3/252	NT	5.1%	coding (585/765 nt)	PP_5562	hypothetical protein
	?	NC_002947	3497088 =	57 (0.990)					coding (509/765 nt)	PP_5562	hypothetical protein

GTGCTGCTGCGGATGACCGAGTCGTCGGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGATGCG  >  NC_002947/3496941‑3497236                                                                                                                                                    |                                                                                                                                                      cccaaccgcagcagcgccgagctgtaccgcttcgtggtgcactacctggtgctgttctactgcctgagcaaGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACtt                                                                                                                                                      <  5:382825‑M1/78‑1 (MQ=255)     accgcagcagcgccgagctgtaccgcttcgtggtgcactacctggtgctgttctactgcctgagcaaGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTc                                                                                                                                                  >  6:382825‑M1/68‑149 (MQ=255)      ccgcagccgcgccgagctgtaccgcttcgtggtgcactacctggtgctgttctactgcctgagcaaGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCa                                                                                                                                                 >  2:292331‑M1/67‑149 (MQ=255)        tgcGGATGACCGAGTCGTCGGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAgg                                                                                                                                               >  8:180083/1‑149 (MQ=255)        tgcGGATGACCGAGTCGTCGGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAgg                                                                                                                                               >  8:320094/1‑149 (MQ=255)             aTGACCGAGTCGTCGGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAgg                                                                                                                                               >  6:214181/1‑144 (MQ=255)             aTGACCGAGTCGTCGGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAgg                                                                                                                                               <  5:214181/144‑1 (MQ=255)              tGACCGAGTCGTCGGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAg                                                                                                                                        <  7:96779/149‑1 (MQ=255)                 ccGAGTCGTCGGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAAc                                                                                                                                     <  1:129401/149‑1 (MQ=255)                        gtcgGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGc                                                                                                                                                    >  2:355508/1‑128 (MQ=255)                        gtcgGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGc                                                                                                                                                    <  1:355508/128‑1 (MQ=255)                           gggAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAgg                                                                                                                            >  5:346726/1‑148 (MQ=255)                           gggAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGt                                                                                                                           >  3:85437/1‑149 (MQ=255)                            ggAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTa                                                                                                                          <  3:128412/149‑1 (MQ=255)                                gTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTg                                                                                                                       >  1:339335/1‑148 (MQ=255)                                            ccGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCgg                                                                                                          <  3:288285/149‑1 (MQ=255)                                               gCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGACCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTa                                                                                                        >  3:255710/1‑148 (MQ=255)                                                 gAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAg                                                                                                     <  4:342347/149‑1 (MQ=255)                                                     tgatgaCGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCg                                                                                                 >  7:3980/1‑149 (MQ=255)                                                      gatgaCGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCgg                                                                                                >  5:192820/1‑149 (MQ=255)                                                      gatgaCGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCgg                                                                                                >  1:46698/1‑149 (MQ=255)                                                       atgaCGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGgc                                                                                               <  2:339335/149‑1 (MQ=255)                                                         gaCGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCGCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACCGCACCGGGTAGTGCACCACGAGGCGGTCCAGCTCGgcgc                                                                                             >  4:219241/1‑149 (MQ=255)                                                          aCGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGgcgc                                                                                             <  2:46698/148‑1 (MQ=255)                                                            gCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGCAGCGGTACAGCTCGGCgctgc                                                                                          >  7:231063/1‑149 (MQ=255)                                                              aGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGctgctg                                                                                        >  3:13238/1‑149 (MQ=255)                                                              aGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGctgctg                                                                                        >  2:299181/1‑149 (MQ=255)                                                              aGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGctgctg                                                                                        <  6:346726/149‑1 (MQ=255)                                                                aaCGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCg                                                                                      <  8:3980/149‑1 (MQ=255)                                                                 tgagcaagtcgcctggccttgggcggctgttcgagggcctgcgctacggcctgagcttcgagcgcctgaagggctttggcgacTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCGGCTGCgg                                                                                     >  2:292331‑M2/84‑149 (MQ=255)                                                                 aCGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCg                                                                                      <  6:283428/148‑1 (MQ=255)                                                                  gagcaagtcgcctggccttgggcggctgttcgagggcctgcgctacggcctgagcttcgagcgcctgaagggctttggcgacTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGt                                                                                    >  6:382825‑M2/83‑149 (MQ=255)                                                                      aagtcgcctggccttgggcggctgttcgagggcctgcgctacggcctgagcttcgagcgcctgaagggctttggcgacTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTggg                                                                                <  5:382825‑M2/71‑1 (MQ=255)                                                                        GTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGt                                                                              <  3:266642‑M1/149‑1 (MQ=255)                                                                          CGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCt                                                                            <  6:81384‑M1/149‑1 (MQ=255)                                                                            CCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCttt                                                                          <  2:212146‑M1/149‑1 (MQ=255)                                                                             CAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACAAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCttt                                                                          <  3:282702‑M1/148‑1 (MQ=255)                                                                              aaaGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTc                                                                                                                                                  >  7:140463/1‑76 (MQ=255)                                                                              aaaGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTc                                                                                                                                                  <  8:140463/76‑1 (MQ=255)                                                                              aaaGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTtga                                                                        >  6:16803/1‑149 (MQ=255)                                                                               aaGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTtgat                                                                       <  7:320094/149‑1 (MQ=255)                                                                                    cTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTggg                                                                                >  7:53200/1‑135 (MQ=255)                                                                                    cTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTggg                                                                                <  8:53200/135‑1 (MQ=255)                                                                                      tCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTg                                                                >  5:367850/1‑149 (MQ=255)                                                                                       cAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACAtt                                                                 <  4:255710/147‑1 (MQ=255)                                                                                        aGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGc                                                               <  4:13238/148‑1 (MQ=255)                                                                                          gcgcTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTtgat                                                                       >  4:41488/1‑138 (MQ=255)                                                                                          gcgcTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTtgat                                                                       <  3:41488/138‑1 (MQ=255)                                                                                           cgcTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGaaa                                                           <  5:16803/149‑1 (MQ=255)                                                                                              tCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGGCTTTGATGACATTGCGAAACcg                                                        >  3:267827/1‑149 (MQ=255)                                                                                                gAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACcgc                                                       <  5:215282/148‑1 (MQ=255)                                                                                                    cTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCgcgc                                                     >  7:344081/1‑146 (MQ=255)                                                                                                    cTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCgcgc                                                     <  8:344081/146‑1 (MQ=255)                                                                                                     tCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGTGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAgg                                                 >  3:340963/1‑149 (MQ=255)                                                                                                     tCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAgg                                                 >  2:194274/1‑149 (MQ=255)                                                                                                       aGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTc                                               >  4:133107/1‑149 (MQ=255)                                                                                                       aGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTc                                               >  1:57669/1‑149 (MQ=255)                                                                                                         gCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGGTCAGGCAG‑TAGAACAGCCCCAGGTAGTGCACCCCGCAGCGGTACCGCTCGGCGCTGCTGCGGTTGGGGGCTGGGATGACATTGCGACACCGCGCCAGGTCg                                              >  4:310786/1‑148 (MQ=255)                                                                                                         gCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCg                                              >  2:272845/1‑148 (MQ=255)                                                                                                               gcgcAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCg                                        <  5:81384/148‑1 (MQ=255)                                                                                                               gcgcAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGt                                       <  4:266642/149‑1 (MQ=255)                                                                                                                   aGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGGGAAACCGCGCCAGGTCGAAGGCGTGGaa                                   <  1:212146/149‑1 (MQ=255)                                                                                                                       ccTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGccc                               >  2:373329/1‑149 (MQ=255)                                                                                                                        cTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGt                                                                                                         >  1:346437/1‑74 (MQ=255)                                                                                                                        cTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGt                                                                                                         <  2:346437/74‑1 (MQ=255)                                                                                                                             aCAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCTCCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGc                                         <  6:282691/133‑1 (MQ=255)                                                                                                                             aCAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCTCCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGc                                         >  5:282691/1‑133 (MQ=255)                                                                                                                              cAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCaccacc                         >  5:8437/1‑148 (MQ=255)                                                                                                                                   gccCAAGGCCAGGCGACTTGCTCAGGCAGTTAGAACAGCACCAGTTATTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGGCTTGGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAACCCCCCCACCCcgcg                    >  1:35489/1‑149 (MQ=255)                                                                                                                                         ggCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCggg             <  7:180083/149‑1 (MQ=255)                                                                                                                                         ggCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCggg             >  7:291674/1‑149 (MQ=255)                                                                                                                                         ggCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCggg             >  2:62265/1‑149 (MQ=255)                                                                                                                                          gCCAGGCGACTTGCTCAGGCAG‑TAGTACAGCAGCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTTCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGc            <  3:25627/149‑1 (MQ=255)                                                                                                                                          gCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGc            <  1:299181/149‑1 (MQ=255)                                                                                                                                                cgacTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGa      <  4:267827‑M2/145‑1 (MQ=255)                                                                                                                                                 gacTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGAt     <  6:367850‑M2/146‑1 (MQ=255)                                                                                                                                                  acTTGCTCAGGCAG‑TAGACCAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGgtcgggcttccacgc    <  3:30736‑M2/147‑8 (MQ=255)                                                                                                                                                   cTTGCGCAGGCCG‑TAGAACAGCACCAGGTAGCGCACCACGACGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAACCCGCGCCAGGTCGAAGGCGGGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGATGc   <  3:219241‑M2/148‑1 (MQ=255)                                                                                                                                                    ttGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGATGCg  >  4:4300/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      GTGCTGCTGCGGATGACCGAGTCGTCGGGAAGTTCCGAGCGCACCGGCGAGCTGATGACGCAGAACGGCAGGTCGCCAAAGCCCTTCAGGCGCTCGAAGCTCAGGCCGTAGCGCAGGCCCTCGAACAGCCGCCCAAGGCCAGGCGACTTGCTCAGGCAG‑TAGAACAGCACCAGGTAGTGCACCACGAAGCGGTACAGCTCGGCGCTGCTGCGGTTGGGGTCTTTGATGACATTGCGAAACCGCGCCAGGTCGAAGGCGTGGAAGCCCACCACCCAGCGGGTCGGGCTGGTGATGCG  >  NC_002947/3496941‑3497236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.