| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3555711 = | 46 (0.760) | 3 (0.050) | 3/252 | NT | 6.5% | coding (128/1188 nt) | PP_3140 | group 2 family glycosyl transferase |
| ? | NC_002947 | 3555757 = | 43 (0.750) | coding (174/1188 nt) | PP_3140 | group 2 family glycosyl transferase | |||||
GTGCCAACCGGGCCGTGTCATCCGAACAGTTGTCTGCCACGACCAGCAAGCGGTCGCCGTCCAGCAGTTGCGGCGTAACGCTGGCCAGCATCGCACGAATGACCAGCGCCTCATCGTGGGCGGGCACCAACACCGCCACTCGCGGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3555860‑3555711‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctGGTCATTCGTGCGATGCTGGCCAGCGTTACGCCGCAACTGCTGGACGGCGACCGCTTGCTGGTCGTGGCAGACAACTGTTCGGATGACACGGCCCGGTTGGCACGCGCGTCCGGTGCCGAAGTGGTAGAGCGCCACGATACGCGCTT > NC_002947/3555757‑3555903 GTGCCAACCGGGCCGTGTCATCCGAACAGTTGTCTGCCACGACCAGCAAGCGGTCGCCGTCCAGCAGTTGCGGCGTAACGCTGGCCAGCATCGCACGAATGACCAGCGCCTCATCGTGGGCGGGCACCAACACCGCCACTCGCGGGCGC > 7:135344/1‑149 GCACGAATGACCAGCGCCTCATCGTGGGCGGGCACCAACACCGCCACTCGCGGGCGCTGGTCATTCGTGCGATGCTGGCCAGCGTTACGCCGCAACTGCTGGACGGCGACCGCTTGCTGGTCGTGGCAGACAACTGTTCGGATGACACG > 5:237967/1‑149 CAGCGCCTCATCGTGGGCGGGCACCAACACCGCCACTCGCGGGCGCTGGTCATTCGTGCGATGCTGGCCAGCGTTACGCCGCAACTGCTGGACGGCGACCGCTTGCTGGTCGTGGCAGACAACTGTTCGGATGACACGGCCCGGTTGGC > 3:11925/1‑149 ATCGTGGGCGGGCACCAACACCGCCACTCGCGGGCGCTGGTCATTCGTGCGATGCTGGCCAGCGTTACGCCGCAACTGCTGGACGGCGACCGCTTGCTGGTCGTGGCAGACAACTGTTCGGATGACACGGCCCGGTTGGCACGCGCGT < 6:237967/148‑1 GGCGCTGGTCATTCGTGCGATGCTGGCCAGCGTTACGCCGCAACTGCTGGACGGCGACCGCTTGCTGGTCGTGGCAGACAACTGTTCGGATGACACGGCCCGGTTGGCACGCGCGTCCGGTGCCGAAGTGGTAGAGCGCCACGATACGC > 4:191144/1‑149 GCGCTGGTAATTCTTGCGATGCTGCCCAGCGTTACGCCGCAACTGCTGGACGGCGCCCGCTTGCTGGTCGTGGCTGACAACTGTTCGGATGACACGGCCCGGTTGGCACGCGCGTCCGGTGCCGAAGTGGTAGAGCGCCACGATACGCG > 4:103419/1‑149 GCTGGTCATTCGTGCGATGCTGGCCAGCGTTACGCCGCAACTGCTGGACGGCGACCGCTTGCTGGTCGTGGCAGACAACTGTTCGGATGACACGGCCCGGTTGGCACGCGCGTCCGGTGCCGAAGTGGTAGAGCGCCACGATACGCGCT > 6:116384/1‑149 CTGGTCATTCGTGCGATGCTGGCCAGCGTTACGCCGCAACTGCTGGACGGCGACCGCTTGCTGGTCGTGGCAGACAACTGTTCGGATGACACGGCCCGGTTGGCACGCGCGTCCGGTGCCGAAGTGGTAGAGCGCCACGATACGCGCTT < 3:246980/149‑1 GTGCCAACCGGGCCGTGTCATCCGAACAGTTGTCTGCCACGACCAGCAAGCGGTCGCCGTCCAGCAGTTGCGGCGTAACGCTGGCCAGCATCGCACGAATGACCAGCGCCTCATCGTGGGCGGGCACCAACACCGCCACTCGCGGGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3555860‑3555711‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgctGGTCATTCGTGCGATGCTGGCCAGCGTTACGCCGCAACTGCTGGACGGCGACCGCTTGCTGGTCGTGGCAGACAACTGTTCGGATGACACGGCCCGGTTGGCACGCGCGTCCGGTGCCGAAGTGGTAGAGCGCCACGATACGCGCTT > NC_002947/3555757‑3555903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |