New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3857595	66 (1.100)	4 (0.070)	4/254	NT	5.5%	coding (173/231 nt) noncoding (53/224 nt)	PP_3407 PP_mr41	hypothetical protein Cobalamin regulatory region
	?	NC_002947	= 3857629	73 (1.260)					coding (207/231 nt) noncoding (87/224 nt)	PP_3407 PP_mr41	hypothetical protein Cobalamin regulatory region

TTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3857465‑3857595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggCATTGTCCGGCCCTGCTGAAGGGCCTGGGACGCACCGGTTTCCCGTTTCACCCCCTGAGGGGCACCTGAACGCGAGGCATAAGGAGAGCATGGGGCGGGCTTGGCGTCAATGTCATACAGCGTGCGAGGCTGTCGAACAGCAGGTAC  <  NC_002947/3857629‑3857483                                                                                                                                                                                                                                                                                        TTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGCATTGTCCGGCCCTGCT                                                                                                                                    >  5:366908/1‑148                             TTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGCATTGTCCGGCCCTGCTGAAGGGCCTGGGACGCACCGGTTTCCC                                                                                                         <  6:366908/147‑1                                      CTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGCATTGTCCGGCCCTGCTGAAGGGCCTGGGACGCACCGGTTTCCCGT                                                                                                       >  5:151232/1‑140                                      CTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGGCATTGTCCGGCCCTGCTGAAGGGCCTGGGACGCACCGGTTTCCCGT                                                                                                       <  6:151232/140‑1                                                                                                                                 CGGCATTGTCCGGCCCTGCTGAAGGGCCTGGGACGCACCGGTTTCCCGTTTCACCCCCTGAGGGGCACCTGAACGCGAGGCATAAGGAGAGCATGGGGCGGGCTTGGCGTCAATGTCATACAGCGTGCGAGGCTGTCGAACAGCAGGTA   <  7:71433/149‑1                                                                                                                                  GGCATTGTCCGGCCCTGCTGAAGGGCCTGGGACGCACCGGTTTCCCGTTTCACCCCCTGAGGGGCACCTGAACGCGAGGCATAAGGAGAGCATGGGGCGGGCTTGGCGTCAATGTCATACAGCGTGCGAGGCTGTCGAACAGCAGGTAC  <  3:292233/149‑1                                                                                                                                   GCATTGTCCGGCCCTGCTGAAGGGCCTGGGACGCACCAGTTTCCCGTTTCACCCCCTGAGGGGCACCTGAACGCGAGGCATAAGGAGAGCATGGGGCGGGCTTGGCGTCAATGTCATACAGCGTGCGAGGCTGTCGAACAGCAGGTAC  >  8:55713/1‑148                                                                                                                                                                                                                                                                                        TTCAGGCCTGAGCCTGTCGTACCTGCTGTTCGACAGCCTCGCACGCTGTATGACATTGACGCCAAGCCCGCCCCATGCTCTCCTTATGCCTCGCGTTCAGGTGCCCCTCAGGGGGTGAAACGGGAAACCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3857465‑3857595 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggCATTGTCCGGCCCTGCTGAAGGGCCTGGGACGCACCGGTTTCCCGTTTCACCCCCTGAGGGGCACCTGAACGCGAGGCATAAGGAGAGCATGGGGCGGGCTTGGCGTCAATGTCATACAGCGTGCGAGGCTGTCGAACAGCAGGTAC  <  NC_002947/3857629‑3857483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.