| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4057616 | 59 (0.980) | 5 (0.080) | 3/258 | NT | 7.8% | coding (46/2406 nt) | PP_3575 | ferric siderophore receptor |
| ? | NC_002947 | = 4057640 | 61 (1.040) | coding (22/2406 nt) | PP_3575 | ferric siderophore receptor | |||||
TGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4057540‑4057616‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATTGTTCGCGATGAGCCTGCTGTTGTGTGCACCCGCCTGGGCCGATGAGCCGGCCCGGCGTACGTTCCAGGTGGCGCCAGCCAGCCTGGGTGCCGCTTTGACCCATTTCGCCGA < NC_002947/4057640‑4057495 TGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATT > 5:359433/1‑112TGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATT < 6:359433/112‑1TGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATT > 7:249830/1‑112TGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATT < 8:249830/112‑1 ATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCACATCCATTGTTCGCGATGAGCCTGCTGTTGTGTGCACCCGCCTGGGCCGATGAGCCGGCCCGGCGTACGTTCCAGGTGGCGCCAGCCAGCCTGGGTGCCGCT > 3:201768/1‑149 GCCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATTGTTCGCGATGAGCCTGCTGTTGTGTGCACCCGCCTGGGCCGATGAGCCGGCCCGGCGTACGTTCCAGGTGGCGCCAGCCAGCCTGGGTGCCGCTTTGACCCATTTCGCCGA < 5:82902/148‑1 GCCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATTGTTCGCGATGAGCCTGCTGTTGTGTGCACCCGCCTGGGCCGATGAGCCGGCCCGGCGTACGTTCCAGGTGGCGCCAGCCAGCCTGGGTGCCGCTTTGACCCATTTCGCCGA < 8:179657/148‑1 GCCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATTGTTCGCGATGAGCCTGCTGTTGTGTGCACCCGCCTGGGCCGATGAGCCGGCCCGGCGTACGTTCCAGGTGGCGCCAGCCAGCCTGGGTGCCGCTTTGACCCATTTCGCC < 1:364317/146‑1 GCCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATTGTTCGCGATGAGCCTGCTGTTGTGTGCACCCGCCTGGGCCGATGAGCCGGCCCGGCGTACGTTCCAGGTGGCGCCAGCCAGCCTGGGTGCCGCTTTGACCCATTTCGCC < 5:296313/146‑1 TGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4057540‑4057616‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcCGCCTGCGCCCACTGGCGCGCGCAGCACATCCATTGTTCGCGATGAGCCTGCTGTTGTGTGCACCCGCCTGGGCCGATGAGCCGGCCCGGCGTACGTTCCAGGTGGCGCCAGCCAGCCTGGGTGCCGCTTTGACCCATTTCGCCGA < NC_002947/4057640‑4057495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |