New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 405761659 (0.980)5 (0.080) 3/258 NT 7.8% coding (46/2406 nt) PP_3575 ferric siderophore receptor
?NC_002947 = 4057640 61 (1.040)coding (22/2406 nt) PP_3575 ferric siderophore receptor

CAGCGAAAGGCTGACACCGGCCTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTTCTCGTGCGGTCAGGCTCA  >  NC_002947/4057470‑4057760
                                                                                                                                                  |                                                                                                                                                  
cAGCGAAAGGCTGACACCGGCCTGGTCGGAGAAATGGGTCAAAGCGGCAGCCAGGCTGGCTGGAGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGtgct                                                                                                                                                   <  1:260153/148‑1 (MQ=255)
      aaGGCTGACACCGGCCTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTgcgcgcg                                                                                                                                            >  6:105375/1‑149 (MQ=255)
      aaGGCTGACACCGGCCTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTgcgcgcg                                                                                                                                            >  2:345512/1‑149 (MQ=255)
         gCTGACACCGGCCTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTgcgcgcgc                                                                                                                                           >  4:354103/1‑147 (MQ=255)
           tGACACCGGCCTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGt                                                                                                                                       >  6:331384/1‑149 (MQ=255)
             acacCGGCCTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGt                                                                                                                                       <  3:342667/147‑1 (MQ=255)
                   gCCTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAg                                                                                                                               >  1:206619/1‑149 (MQ=255)
                    ccTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGgcg                                                                                                                                  >  1:314820/1‑145 (MQ=255)
                    ccTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGgcg                                                                                                                                  <  2:314820/145‑1 (MQ=255)
                         tCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGgc                                                                                                                          <  5:82902‑M2/148‑3 (MQ=255)
                         tCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGgc                                                                                                                          <  8:179657‑M2/148‑3 (MQ=255)
                           ggCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGgc                                                                                                                          <  5:296313‑M2/146‑3 (MQ=255)
                           ggCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGgc                                                                                                                          <  1:364317‑M2/146‑3 (MQ=255)
                                 aTGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTa                                                                                                                 <  7:179657/149‑1 (MQ=255)
                                    ggTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACt                                                                                                               <  4:253669/148‑1 (MQ=255)
                                    ggTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTg                                                                                                              <  1:258924/149‑1 (MQ=255)
                                      tCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTg                                                                                                              >  4:107595/1‑147 (MQ=255)
                                        aaaGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAgg                                                                                                          >  3:120272/1‑149 (MQ=255)
                                        aaaGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAgg                                                                                                          <  1:345512/149‑1 (MQ=255)
                                        aaaGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAgg                                                                                                          >  5:278146/1‑149 (MQ=255)
                                        aaaGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAg                                                                                                           <  5:110876/148‑1 (MQ=255)
                                          aGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCCGCCTGCGCCCACTGGCGCGCGCAgcacatccattgttcgcgat                                                                                                        >  3:201768‑M2/1‑129 (MQ=255)
                                            cGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCAtt                                                                                                      >  8:137369/1‑149 (MQ=255)
                                              gCACCCAGGCTGGCTGGCGCCACCTGCAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCCCACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTg                                                                                                     >  7:71083/1‑148 (MQ=255)
                                                aCCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACATCAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTg                                                                                                     <  1:119885/146‑1 (MQ=255)
                                                aCCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTg                                                                                                     >  2:119885/1‑146 (MQ=255)
                                                  ccAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAAc                                                                                                  >  3:17655/1‑147 (MQ=255)
                                                  ccAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGAGCGCCAGAGGGCGCAGTCGGCAAGATTTAACTGCCGGAATTGAAc                                                                                                  >  5:151671/1‑147 (MQ=255)
                                                    aGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAgg                                                                                             <  6:278146/149‑1 (MQ=255)
                                                      gctggctgGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCt                                                                                           >  6:62568/1‑149 (MQ=255)
                                                      gctggctgGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCt                                                                                           >  2:14819/1‑149 (MQ=255)
                                                          gctggcGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTcccc                                                                                       <  4:120272/149‑1 (MQ=255)
                                                           ctggcGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCt                                                                                      <  5:105375/149‑1 (MQ=255)
                                                              gcgcCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCtttt                                                                                   <  1:334232/149‑1 (MQ=255)
                                                                    ccTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGTATGTGCTGCGCGCTCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTtc                                                                             <  7:137369/149‑1 (MQ=255)
                                                                      tGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCcgcctgcgcccactggcgcgcgcagcacatccatt                                                                                                                 <  8:249830‑M1/112‑36 (MQ=255)
                                                                      tGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCcgcctgcgcccactggcgcgcgcagcacatccatt                                                                                                                 >  7:249830‑M1/1‑77 (MQ=255)
                                                                      tGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCcgcctgcgcccactggcgcgcgcagcacatccatt                                                                                                                 <  6:359433‑M1/112‑36 (MQ=255)
                                                                      tGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCcgcctgcgcccactggcgcgcgcagcacatccatt                                                                                                                 >  5:359433‑M1/1‑77 (MQ=255)
                                                                        gAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCAGACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTcc                                                                          <  8:232004/148‑1 (MQ=255)
                                                                        gAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCt                                                                         <  2:206619/149‑1 (MQ=255)
                                                                                 ccgggccggCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAAt                                                                <  2:21966/149‑1 (MQ=255)
                                                                                        ggCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGc                                                         <  3:107595/149‑1 (MQ=255)
                                                                                         gCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACaa                                                                                               >  6:209731/1‑110 (MQ=255)
                                                                                         gCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACaa                                                                                               <  5:209731/110‑1 (MQ=255)
                                                                                              tCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTg                                                    >  2:94354/1‑148 (MQ=255)
                                                                                                ggCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGaa                                                  <  5:331384/148‑1 (MQ=255)
                                                                                                      ggCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACACAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAg                                            <  1:94354/149‑1 (MQ=255)
                                                                                                      ggCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAgg                                           <  3:354103/149‑1 (MQ=255)
                                                                                                              cacacaACAGCAGGCTCATCGCGAACAATGGATGTTCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGtc                                  >  4:65946/1‑149 (MQ=255)
                                                                                                               acacaACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGatgatgc                                 >  5:281287/1‑143 (MQ=255)
                                                                                                                cacaACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGtctc                                <  4:17655/149‑1 (MQ=255)
                                                                                                                cacaACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGtct                                 >  7:8954/1‑148 (MQ=255)
                                                                                                                 acaacaGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCa                               >  8:314187/1‑149 (MQ=255)
                                                                                                                  caacaGCAGGCTCATAGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTAATGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCTAGTGAAAAAAAGCGGACAGTCTCag                              >  8:281325/1‑148 (MQ=255)
                                                                                                                   aacaGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCAt                              >  7:26627/1‑148 (MQ=255)
                                                                                                                     cagcagGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGAt                           >  8:104328/1‑149 (MQ=255)
                                                                                                                        cagGCTCTTCGCGAACAATTGATGTGCTGCGCGCGCGAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCTTTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGa                        <  8:350113/149‑1 (MQ=255)
                                                                                                                        cagGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGa                        >  4:144895/1‑149 (MQ=255)
                                                                                                                        cagGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGa                        <  3:144895/149‑1 (MQ=255)
                                                                                                                             tCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTtc                   >  8:23661/1‑149 (MQ=255)
                                                                                                                               aTCGCGAACAATGGATGTGCtgcgcgcgccagtgggcgcaggcggcacatccattgttcgcgatgagcctgctgttgtgtgcacccgcctgggccgatgagccggcccggcgtacgttccaggtggcgccagccagcctgggtgccgct                   >  3:201768‑M1/1‑20 (MQ=255)
                                                                                                                               aTCGCGAACAATGGATGTGCTGCGCTCGCCATTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTtctc                 <  7:281325/149‑1 (MQ=255)
                                                                                                                               aTCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTtctc                 <  2:364317/149‑1 (MQ=255)
                                                                                                                                tCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTtctc                 >  5:295819/1‑148 (MQ=255)
                                                                                                                                tCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTtctc                 <  6:295819/148‑1 (MQ=255)
                                                                                                                                       cAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTTCTCGTGCGGt          >  8:306005/1‑148 (MQ=255)
                                                                                                                                        aaTGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGgcacatccattgttcgcgatgagcctgctgttgtgtgcacccgcctgggccgatgagccggcccggcgtacgttcca                                               <  8:249830‑M2/112‑78 (MQ=255)
                                                                                                                                        aaTGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGgcacatccattgttcgcgatgagcctgctgttgtgtgcacccgcctgggccgatgagccggcccggcgtacgttcca                                               >  7:249830‑M2/1‑35 (MQ=255)
                                                                                                                                        aaTGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGgcacatccattgttcgcgatgagcctgctgttgtgtgcacccgcctgggccgatgagccggcccggcgtacgttcca                                               >  5:359433‑M2/1‑35 (MQ=255)
                                                                                                                                        aaTGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGgcacatccattgttcgcgatgagcctgctgttgtgtgcacccgcctgggccgatgagccggcccggcgtacgttcca                                               <  6:359433‑M2/112‑78 (MQ=255)
                                                                                                                                        aaTGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTTCTCGTGCGGt          >  2:137936/1‑147 (MQ=255)
                                                                                                                                        aaTGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTTCTCGTGCGGTCa        <  7:104328/149‑1 (MQ=255)
                                                                                                                                        aaTGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTACTACCTGTAATGACCGGCGAGTGAAAAAAAGGGGCACAGTCTCATGATCGATTTTCTCGTGCGGTc         <  1:231892/149‑1 (MQ=255)
                                                                                                                                                tgctgcGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACaa                                                                                               >  5:358623/1‑55 (MQ=255)
                                                                                                                                                tgctgcGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACaa                                                                                               <  6:358623/55‑1 (MQ=255)
                                                                                                                                                 gccgcctgcgcccactggcgcgcgcagcacatccattgttcgcgatgagcctgctgttgtgtgcacccgcctgggccgatgagccggcccggcgtacgttccaggtggcgccagccagcctgggtgccgctttgacccatttcgccga  <  8:179657‑M1/148‑147 (MQ=255)
                                                                                                                                                 gccgcctgcgcccactggcgcgcgcagcacatccattgttcgcgatgagcctgctgttgtgtgcacccgcctgggccgatgagccggcccggcgtacgttccaggtggcgccagccagcctgggtgccgctttgacccatttcgccga  <  5:82902‑M1/148‑147 (MQ=255)
                                                                                                                                                 gccgcctgcgcccactggcgcgcgcagcacatccattgttcgcgatgagcctgctgttgtgtgcacccgcctgggccgatgagccggcccggcgtacgttccaggtggcgccagccagcctgggtgccgctttgacccatttcgcc    <  1:364317‑M1/146‑145 (MQ=255)
                                                                                                                                                 gccgcctgcgcccactggcgcgcgcagcacatccattgttcgcgatgagcctgctgttgtgtgcacccgcctgggccgatgagccggcccggcgtacgttccaggtggcgccagccagcctgggtgccgctttgacccatttcgcc    <  5:296313‑M1/146‑145 (MQ=255)
                                                                                                                                                  ctgcGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAggg                                          >  5:135330/1‑106 (MQ=255)
                                                                                                                                                  ctgcGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAggg                                          <  6:135330/106‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CAGCGAAAGGCTGACACCGGCCTGGTCGGCGAAATGGGTCAAAGCGGCACCCAGGCTGGCTGGCGCCACCTGGAACGTACGCCGGGCCGGCTCATCGGCCCAGGCGGGTGCACACAACAGCAGGCTCATCGCGAACAATGGATGTGCTGCGCGCGCCAGTGGGCGCAGGCGGCAAGATTTTACTGCAGGCATTGAACAAGGCTCCCCTTTTATTTTCTCCTACCGGTAATGACCGGCGAGTGAAAAAAAGGGGACAGTCTCATGATCGATTTTCTCGTGCGGTCAGGCTCA  >  NC_002947/4057470‑4057760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.