| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4093391 | 56 (0.930) | 4 (0.070) | 4/254 | NT | 7.9% | coding (388/1581 nt) | PP_3602 | 2,5‑dioxovalerate dehydrogenase |
| ? | NC_002947 | = 4093458 | 40 (0.690) | coding (455/1581 nt) | PP_3602 | 2,5‑dioxovalerate dehydrogenase | |||||
ACGAACTGGATGACGCCTTCGTCGCCATCGTCTGCCGCGAAACCGCCCTGCCCGCCGCCCGCATCCAGGGCGAGCGCGGCCGCACCAGCGGGCAGATGCGCCTGTTCGCCCAAGTGCTGCGCCGCGGCGACTTTCTCGGCGCACGCATCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4093239‑4093391‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccGGGCCTACACCGATGCGCATCTGGCGCAGGTCTACGCGTGGCAGCGGCTGGCGCTCGGGCAGTGCCAGGTCGAT < NC_002947/4093458‑4093385 ACGAACTGGATGACGCCTTCGTCGCCATCGTCTGCCGCGAAACCGCCCTGCCCGCCGCCCGCATCCAGGGCGAGCGCGGCCGCACCAGCGGGCAGATGCGCCTGTTCGCCCAAGTGCTGCGCCGCGGCGACTTTCTCGGCGCACGCATC < 5:280626/149‑1ACGAACTGGATGACGCCTTCGTCGCCATCGTCTGCCGCGAAACCGCCCTGCCCGCCGCCCGCATCCAGGGCGAGCGCGGCCGCACCAGCGGGCAGATGCGCCTGTTCGCCCAAGTGCTGCGCCGCGGCGACTTTCTCGGCGCACGCATC < 8:310601/149‑1 CGAACAGGATGACGCCTTCGTCGCCATCGTCTGCCGCGAAACCGCCCTGCCCGCCGCCCGCATCCAGGGCGAGCGCGGCCGCACCAGCGGGCAGATGCGCCTGTTCGCCCAAGTGCTGCGCCGCGGCGACTTTCTCGGCGCACGCATCG < 8:232694/149‑1 GCGCCTGTTCGCCCAAGTGCTGCGCCGCGGCGACTTTCTCGGCGCACGCATCGACCGGGCCTACACCGATGCGCATCTGGCGCAGGTCTACGCGTGGCAGCGGCTGGCGCTCGGGCAGTGCCAGGTCGAT > 1:138218/1‑130 GCGCCTGTTCGCCCAAGTGCTGCGCCGCGGCGACTTTCTCGGCGCACGCATCGACCGGGCCTACACCGATGCGCATCTGGCGCAGGTCTACGCGTGGCAGCGGCTGGCGCTCGGGCAGTGCCAGGTCGAT < 2:138218/130‑1 TTTCTCGGCGCACGCATCGACCGGGCCTACACCGATGCGCATCTGGCGCAGGTCTACGCGTGGCAGCGGCTGGCGCTCGGGCAGT < 5:320728/85‑1 TTTCTCGGCGCACGCATCGACCGGGCCTACACCGATGCGCATCTGGCGCAGGTCTACGCGTGGCAGCGGCTGGCGCTCGGGCAGT > 6:320728/1‑85 ACGAACTGGATGACGCCTTCGTCGCCATCGTCTGCCGCGAAACCGCCCTGCCCGCCGCCCGCATCCAGGGCGAGCGCGGCCGCACCAGCGGGCAGATGCGCCTGTTCGCCCAAGTGCTGCGCCGCGGCGACTTTCTCGGCGCACGCATCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4093239‑4093391‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaccGGGCCTACACCGATGCGCATCTGGCGCAGGTCTACGCGTGGCAGCGGCTGGCGCTCGGGCAGTGCCAGGTCGAT < NC_002947/4093458‑4093385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |