New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4099369 = | 53 (0.880) | 4 (0.070) | 4/252 | NT | 7.9% | coding (649/1215 nt) | PP_3607 | membrane protein |
? | NC_002947 | 4099406 = | 43 (0.750) | coding (612/1215 nt) | PP_3607 | membrane protein |
CGTGGTGCTTGAGAAGCGCCGGCATGGCGCGCTTGAAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4099409‑4099369 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcacCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAGCACCGCAGGCCCTATCCCCCACACCTGCACGATCGAGGTGGCCGGAAGCGACGGCAAGGCAAACCACCAATCGGCATGGTGGGTGGCGCTGACCGAGCCGAT > NC_002947/4099406‑4099552 CGTGGTGCTTGAGAAGTGCCGGCATGGCGCGCTTGAAGCACCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAGCACCGCAGGCCCTATCCCCCACACCTGCACGATCGAGGTGGCCGGAA > 3:84160/1‑133 CGTGGTGCTTGAGAAGTGCCGGCATGGCGCGCTTGAAGCACCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAGCACCGCAGGCCCTATCCCCCACACCTGCACGATCGAGGTGGCCGGAA < 4:84160/133‑1 GTGGTGCTTGAGAAGCGCCGGCATGGCGCGCTTGAAGCACCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAGCACCGCAGGCCCTATCCCC > 5:26870/1‑104 GTGGTGCTTGAGAAGCGCCGGCATGGCGCGCTTGAAGCACCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAGCACCGCAGGCCCTATCCCC < 6:26870/104‑1 AAGCACCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAGCACCGCAGGCCCTATCCCCCACACCTGCACGATCGAGGTGGCCGGAAGCGACGGCAAGGCAAACCACCAATCGGCATGGTGGGTGGCGCTGA > 7:243033/1‑143 AAGCACCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAGCACCGCAGGCCCTATCCCCCACACCTGCACGATCGAGGTGGCCGGAAGCGACGGCAAGGCAAACCACCAATCGGCATGGTGGGTGGCGCTGA < 8:243033/143‑1 AAGCACCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAACGCCGCAGGCCCTATCCCCCACACCTGCACGATCGAGGTGGCCGGAAGCGACGGCAAGGCAAACCACCAATCGGCATGGTGGGTGGCGCTGACCGAGC > 7:172835/1‑149 ACCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAGCACCGCAGGCCCTATCCCCCACACCTGCACGATCGAGGTGGCCGGAAGCGACGGCAAGGCAAACCACCAATCGGCATGGTGGGTGGCGCTGACCGAGCCGAT < 3:157147/149‑1 CGTGGTGCTTGAGAAGCGCCGGCATGGCGCGCTTGAAGCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4099409‑4099369 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcacCACGGTGGCCCAGGCGATCAGCCCGAACACTGCCAGGCTTGCCAGCACCGCAGGCCCTATCCCCCACACCTGCACGATCGAGGTGGCCGGAAGCGACGGCAAGGCAAACCACCAATCGGCATGGTGGGTGGCGCTGACCGAGCCGAT > NC_002947/4099406‑4099552 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |