| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4429562 = | 46 (0.760) | 3 (0.050) | 3/248 | NT | 6.3% | coding (600/711 nt) | PP_3923 | phosphoglycerate mutase |
| ? | NC_002947 | 4429602 = | 46 (0.810) | coding (640/711 nt) | PP_3923 | phosphoglycerate mutase | |||||
GTGATTTACACGTCCCCGCAGGGACACAACAAGCCGGGCTTATCGGTAGGTGACAAGCTCCGGCGCCCTCAACAGCTGCACATGGGCCTGGCTGTTGAAGGAGGCCAGTGCCACGTCGCGGCCGCGAAACTTCAGCTGGCTGAGCGACGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4429712‑4429562‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacgtgGCACTGGCCTCCTTCAACAGCCAGGCCCATGTGCAGCTGTTGAGGGCGCCGGAGCTTGTCACCTACCGATAAGCCCGGCTTGTTGTGTCCCTGCGGGGACGTGTAAATCACTCTATAAGGAATGCGCCATGACCTCCGTAGCTGAT > NC_002947/4429602‑4429747 GTGATTTACACGTGACCGGAGGGACACAACAAGCCGGGCTTATCGGTAGGTGACAAGCTCCGGCGCGCTCAACAGCTGCACATGGGCCTGGCTGTTGAAGGAGGCCAGTGCGACGTCGCGGCCGCGAAACTTCAGCTGGGTGAGCGAC < 4:368727/148‑1GTGATTTACACGTCCCCGCAGGGACACAACAAGCCGGGCTTATCGGTAGGTGACAAGCTCCGGCGCCCTCAACAGCTGCACATGGGCCTGGCTGTTGAAGGAGGCCACTGCCACGTCGCGGCCGCGAAACTTCAGCTGGCTGAGCGACG > 5:319098/1‑149 TGATTTACACGTCCCCGCAGGGACACAACAAGCCGGGCTTATCGGTAGGTGACAAGCTCCGGCGCCCTCAACAGCTGCACATGGGCCTGGCTGTTGAAGGAGGCCAGTGCCACGTCGCGGCCGCGAAACTTCAGCTGGCTGAGCGACGT > 8:308677/1‑149 GATTTACACGTCCCCGCAGGGACACAACAAGCCGGGCTTATCGGTAGGTGACAAGCTCCGGCGCCCTCAACAGCTGCACATGGGCCTGGCTGTTGAAGGAGGCCAGTGCCACGTCGCGGCCGCGAAACTTCAGCTGGCTGAGCGACGTG > 4:178810/1‑149 GCCACGTCGCGGCCGCGAAACTTCAGCTGGCTGAGCGACGTGGCACTGGCCTCCTTCAACAGCCAGGCCCATGTGCAGCTGTTGAGGGCGCCGGAGCTTGTCACCTACCGATAAGCCCGGCTTGTTGTGTCCCTGCGGGGACGTGTAAA > 2:332956/1‑149 CACGTCGCGGCCGCGAAACTTCAGCTGGCTGAGCGACGTGGCACTGGCCTCCTTCAACAGCCAGGCCCATGTGCAGCTGTTGAGGGCGCCGGAGCTTGTCACCTACCGATAAGCCCGGCTTGTTGTGTCCCTGCGG > 5:233245/1‑136 CACGTCGCGGCCGCGAAACTTCAGCTGGCTGAGCGACGTGGCACTGGCCTCCTTCAACAGCCAGGCCCATGTGCAGCTGTTGAGGGCGCCGGAGCTTGTCACCTACCGATAAGCCCGGCTTGTTGTGTCCCTGCGG < 6:233245/136‑1 GTGGCACTGGCCTCCTTCAACAGCCAGGCCCATGTGCAGCTGTTGAGGGCGCCGGAGCTTGTCACCTACCGATAAGCCCGGCTTGTTGTGTCCCTGCGGGGACGTGTAAATCACTCTATAAGGAATGCGCCATGACCTCCGTAGCTGAT < 5:26271/149‑1 GTGATTTACACGTCCCCGCAGGGACACAACAAGCCGGGCTTATCGGTAGGTGACAAGCTCCGGCGCCCTCAACAGCTGCACATGGGCCTGGCTGTTGAAGGAGGCCAGTGCCACGTCGCGGCCGCGAAACTTCAGCTGGCTGAGCGACGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4429712‑4429562‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgacgtgGCACTGGCCTCCTTCAACAGCCAGGCCCATGTGCAGCTGTTGAGGGCGCCGGAGCTTGTCACCTACCGATAAGCCCGGCTTGTTGTGTCCCTGCGGGGACGTGTAAATCACTCTATAAGGAATGCGCCATGACCTCCGTAGCTGAT > NC_002947/4429602‑4429747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |